New tools for lineage tracing in cancer in vivo

MG Jones, D Yang, JS Weissman - Annual Review of Cancer …, 2023 - annualreviews.org
During tumor evolution, cancer cells can acquire the ability to proliferate, invade neighboring
tissues, evade the immune system, and spread systemically. Tracking this process remains …

CTLA4 blockade abrogates KEAP1/STK11-related resistance to PD-(L)1 inhibitors

F Skoulidis, HA Araujo, MT Do, Y Qian, X Sun… - Nature, 2024 - nature.com
For patients with advanced non-small-cell lung cancer (NSCLC), dual immune checkpoint
blockade (ICB) with CTLA4 inhibitors and PD-1 or PD-L1 inhibitors (hereafter, PD-(L) 1 …

Genetic Determinants of EGFR-Driven Lung Cancer Growth and Therapeutic Response In Vivo

G Foggetti, C Li, H Cai, JA Hellyer, WY Lin, D Ayeni… - Cancer discovery, 2021 - AACR
In lung adenocarcinoma, oncogenic EGFR mutations co-occur with many tumor suppressor
gene alterations; however, the extent to which these contribute to tumor growth and …

Fitness variation across subtle environmental perturbations reveals local modularity and global pleiotropy of adaptation

G Kinsler, K Geiler-Samerotte, DA Petrov - Elife, 2020 - elifesciences.org
Building a genotype-phenotype-fitness map of adaptation is a central goal in evolutionary
biology. It is difficult even when adaptive mutations are known because it is hard to …

Preclinical models for the study of lung cancer pathogenesis and therapy development

A Arnal-Estapé, G Foggetti… - Cold Spring …, 2021 - perspectivesinmedicine.cshlp.org
Experimental preclinical models have been a cornerstone of lung cancer translational
research. Work in these model systems has provided insights into the biology of lung cancer …

A functional taxonomy of tumor suppression in oncogenic KRAS–driven lung cancer

H Cai, SK Chew, C Li, MK Tsai, L Andrejka, CW Murray… - Cancer discovery, 2021 - AACR
Cancer genotyping has identified a large number of putative tumor suppressor genes.
Carcinogenesis is a multistep process, but the importance and specific roles of many of …

Oncogenic context shapes the fitness landscape of tumor suppression

LM Blair, JM Juan, L Sebastian, VB Tran, W Nie… - Nature …, 2023 - nature.com
Tumors acquire alterations in oncogenes and tumor suppressor genes in an adaptive walk
through the fitness landscape of tumorigenesis. However, the interactions between …

A multiplexed in vivo approach to identify driver genes in small cell lung cancer

MC Lee, H Cai, CW Murray, C Li, YT Shue, L Andrejka… - Cell reports, 2023 - cell.com
Small cell lung cancer (SCLC) is a lethal form of lung cancer. Here, we develop a
quantitative multiplexed approach on the basis of lentiviral barcoding with somatic CRISPR …

CRISPR and transposon in vivo screens for cancer drivers and therapeutic targets

I Noorani, A Bradley, J de la Rosa - Genome biology, 2020 - Springer
Human cancers harbor substantial genetic, epigenetic, and transcriptional changes, only
some of which drive oncogenesis at certain times during cancer evolution. Identifying the …

Fully accessible fitness landscape of oncogene-negative lung adenocarcinoma

M Yousefi, L Andrejka, M Szamecz… - Proceedings of the …, 2023 - National Acad Sciences
Cancer genomes are almost invariably complex with genomic alterations cooperating during
each step of carcinogenesis. In cancers that lack a single dominant oncogene mutation …