Epigenome plasticity in plants

JPB Lloyd, R Lister - Nature Reviews Genetics, 2022 - nature.com
Plant intra-individual and inter-individual variation can be determined by the epigenome, a
set of covalent modifications of DNA and chromatin that can alter genome structure and …

[PDF][PDF] Gene body methylation in plants: mechanisms, functions, and important implications for understanding evolutionary processes

AM Muyle, DK Seymour, Y Lv, B Huettel… - Genome biology and …, 2022 - academic.oup.com
Gene body methylation (gbM) is an epigenetic mark where gene exons are methylated in
the CG context only, as opposed to CHG and CHH contexts (where H stands for A, C, or T) …

Widespread natural variation of DNA methylation within angiosperms

CE Niederhuth, AJ Bewick, L Ji, MS Alabady, KD Kim… - Genome biology, 2016 - Springer
Background DNA methylation is an important feature of plant epigenomes, involved in the
formation of heterochromatin and affecting gene expression. Extensive variation of DNA …

Exploiting induced and natural epigenetic variation for crop improvement

NM Springer, RJ Schmitz - Nature reviews genetics, 2017 - nature.com
Plant breeding has traditionally relied on combining the genetic diversity present within a
species to develop combinations of alleles that provide desired traits. Epigenetic diversity …

Epigenetics for crop improvement in times of global change

I Kakoulidou, EV Avramidou, M Baránek… - Biology, 2021 - mdpi.com
Simple Summary Research on plant epigenetics aims to understand how endogenous,
biotic, and abiotic factors regulate plant development and growth independent of changes in …

Epigenetics: a catalyst of plant immunity against pathogens

A Hannan Parker, SW Wilkinson, J Ton - New Phytologist, 2022 - Wiley Online Library
The plant immune system protects against pests and diseases. The recognition of stress‐
related molecular patterns triggers localised immune responses, which are often followed by …

Transposable element influences on gene expression in plants

CD Hirsch, NM Springer - Biochimica et Biophysica Acta (BBA)-Gene …, 2017 - Elsevier
Transposable elements (TEs) comprise a major portion of many plant genomes and bursts
of TE movements cause novel genomic variation within species. In order to maintain proper …

50 years of Arabidopsis research: highlights and future directions

NJ Provart, J Alonso, SM Assmann… - New …, 2016 - Wiley Online Library
The year 2014 marked the 25th International Conference on Arabidopsis Research. In the
50 yr since the first International Conference on Arabidopsis Research, held in 1965 in …

In response to abiotic stress, DNA methylation confers epigenetic changes in plants

Z Akhter, Z Bi, K Ali, C Sun, S Fiaz, FU Haider, J Bai - Plants, 2021 - mdpi.com
Epigenetics involves the heritable changes in patterns of gene expression determined by
developmental and abiotic stresses, ie, drought, cold, salinity, trace metals, and heat. Gene …

The Aegilops tauschii genome reveals multiple impacts of transposons

G Zhao, C Zou, K Li, K Wang, T Li, L Gao, X Zhang… - Nature Plants, 2017 - nature.com
Wheat is an important global crop with an extremely large and complex genome that
contains more transposable elements (TEs) than any other known crop species. Here, we …