A pragmatic guide to enrichment strategies for mass spectrometry–based glycoproteomics

NM Riley, CR Bertozzi, SJ Pitteri - Molecular & Cellular Proteomics, 2021 - ASBMB
Glycosylation is a prevalent, yet heterogeneous modification with a broad range of
implications in molecular biology. This heterogeneity precludes enrichment strategies that …

Recent advances in glycoproteomic analysis by mass spectrometry

S Suttapitugsakul, F Sun, R Wu - Analytical chemistry, 2019 - ACS Publications
Glycosylation is one of the most common protein modifications and is essential for cells. This
modification is exceptionally complex because glycans are highly diverse and can be …

Cell surface thermal proteome profiling tracks perturbations and drug targets on the plasma membrane

M Kalxdorf, I Günthner, I Becher, N Kurzawa… - Nature …, 2021 - nature.com
Numerous drugs and endogenous ligands bind to cell surface receptors leading to
modulation of downstream signaling cascades and frequently to adaptation of the plasma …

[HTML][HTML] Spatiotemporal proteomic profiling of the pro-inflammatory response to lipopolysaccharide in the THP-1 human leukaemia cell line

CM Mulvey, LM Breckels, OM Crook… - Nature …, 2021 - nature.com
Protein localisation and translocation between intracellular compartments underlie almost
all physiological processes. The hyperLOPIT proteomics platform combines mass …

Chemoproteomics and chemical probes for target discovery

G Drewes, S Knapp - Trends in biotechnology, 2018 - cell.com
Chemical probes represent versatile tools to validate disease-modifying targets. However,
evaluating the selectivity of chemical probes in complex cellular systems is a major …

Thermal proteome profiling: unbiased assessment of protein state through heat-induced stability changes

A Mateus, TA Määttä, MM Savitski - Proteome science, 2016 - Springer
In recent years, phenotypic-based screens have become increasingly popular in drug
discovery. A major challenge of this approach is that it does not provide information about …

Integrative multi-omics and drug–response characterization of patient-derived prostate cancer primary cells

Z Wang, Y Li, W Zhao, S Jiang, Y Huang… - … and Targeted Therapy, 2023 - nature.com
Prostate cancer (PCa) is the second most prevalent malignancy in males across the world. A
greater knowledge of the relationship between protein abundance and drug responses …

Protease‐resistant streptavidin for interaction proteomics

MR Rafiee, G Sigismondo, M Kalxdorf… - Molecular systems …, 2020 - embopress.org
Streptavidin‐mediated enrichment is a powerful strategy to identify biotinylated
biomolecules and their interaction partners; however, intense streptavidin‐derived peptides …

Cell-surface proteomics for the identification of novel therapeutic targets in cancer

L Kuhlmann, E Cummins, I Samudio… - Expert review of …, 2018 - Taylor & Francis
Introduction: Cancer is the second most common cause of death worldwide and its
heterogeneity complicates therapy. Standard cytotoxic regiments disrupt rapidly dividing …

Surfaceome mapping of primary human heart cells with CellSurfer uncovers cardiomyocyte surface protein LSMEM2 and proteome dynamics in failing hearts

L Berg Luecke, M Waas, J Littrell… - Nature cardiovascular …, 2023 - nature.com
Cardiac cell surface proteins are drug targets and useful biomarkers for discriminating
among cellular phenotypes and disease states. Here we developed an analytical platform …