[HTML][HTML] Privacy-preserving artificial intelligence in healthcare: Techniques and applications

N Khalid, A Qayyum, M Bilal, A Al-Fuqaha… - Computers in Biology and …, 2023 - Elsevier
There has been an increasing interest in translating artificial intelligence (AI) research into
clinically-validated applications to improve the performance, capacity, and efficacy of …

Functional genomics data: privacy risk assessment and technological mitigation

G Gürsoy, T Li, S Liu, E Ni, CM Brannon… - Nature Reviews …, 2022 - nature.com
The generation of functional genomics data by next-generation sequencing has increased
greatly in the past decade. Broad sharing of these data is essential for research …

Secure and trustworthy artificial intelligence-extended reality (AI-XR) for metaverses

A Qayyum, MA Butt, H Ali, M Usman, O Halabi… - ACM Computing …, 2024 - dl.acm.org
Metaverse is expected to emerge as a new paradigm for the next-generation Internet,
providing fully immersive and personalized experiences to socialize, work, and play in self …

[HTML][HTML] Privacy-preserving model evaluation for logistic and linear regression using homomorphically encrypted genotype data

S Hong, YA Choi, DS Joo, G Gürsoy - Journal of biomedical informatics, 2024 - Elsevier
Objective: Linear and logistic regression are widely used statistical techniques in population
genetics for analyzing genetic data and uncovering patterns and associations in large …

Storing and analyzing a genome on a blockchain

G Gürsoy, CM Brannon, E Ni, S Wagner, A Khanna… - Genome biology, 2022 - Springer
There are major efforts underway to make genome sequencing a routine part of clinical
practice. A critical barrier to these is achieving practical solutions for data ownership and …

[HTML][HTML] A Study and Analysis of Disease Identification using Genomic Sequence Processing Models: An Empirical Review

SK Ahuja, DD Shrimankar, AR Durge - Current Genomics, 2023 - ncbi.nlm.nih.gov
Human gene sequences are considered a primary source of comprehensive information
about different body conditions. A wide variety of diseases including cancer, heart issues …

Rapid, Reference-Free human genotype imputation with denoising autoencoders

R Dias, D Evans, SF Chen, KY Chen, S Loguercio… - Elife, 2022 - elifesciences.org
Genotype imputation is a foundational tool for population genetics. Standard statistical
imputation approaches rely on the co-location of large whole-genome sequencing-based …

SQUiD: ultra-secure storage and analysis of genetic data for the advancement of precision medicine

J Blindenbach, J Kang, S Hong, C Karam, T Lehner… - Genome Biology, 2024 - Springer
Cloud computing allows storing the ever-growing genotype-phenotype datasets crucial for
precision medicine. Due to the sensitive nature of this data and varied laws and regulations …

Dynamic graph neural network learning for temporal omics data prediction

X Jing, Y Zhou, M Shi - IEEE Access, 2022 - ieeexplore.ieee.org
High-throughput studies of biological systems are rapidly generating a wealth of 'omics'-
scale data. Many of these studies are temporal collecting proteomics and genomics data …

Privacy-preserving cancer type prediction with homomorphic encryption

E Sarkar, E Chielle, G Gursoy, L Chen, M Gerstein… - Scientific reports, 2023 - nature.com
Cancer genomics tailors diagnosis and treatment based on an individual's genetic
information and is the crux of precision medicine. However, analysis and maintenance of …