Packaging of genomic RNA in positive-sense single-stranded RNA viruses: a complex story

M Comas-Garcia - Viruses, 2019 - mdpi.com
The packaging of genomic RNA in positive-sense single-stranded RNA viruses is a key part
of the viral infectious cycle, yet this step is not fully understood. Unlike double-stranded DNA …

3dRNA v2. 0: an updated web server for RNA 3D structure prediction

J Wang, J Wang, Y Huang, Y Xiao - International journal of molecular …, 2019 - mdpi.com
3D structures of RNAs are the basis for understanding their biological functions. However,
experimentally solved RNA 3D structures are very limited in comparison with known RNA …

Analytical techniques to characterize the structure, properties, and assembly of virus capsids

P Kondylis, CJ Schlicksup, A Zlotnick… - Analytical …, 2018 - ACS Publications
Virus capsids, the protective protein shells of viruses with typical dimensions in the
nanometer range, are a challenge to analyze. Analytical techniques need to characterize the …

Multiple capsid protein binding sites mediate selective packaging of the alphavirus genomic RNA

RS Brown, DG Anastasakis, M Hafner… - Nature …, 2020 - nature.com
The alphavirus capsid protein (Cp) selectively packages genomic RNA (gRNA) into the viral
nucleocapsid to produce infectious virus. Using photoactivatable ribonucleoside …

Viruses with different genome types adopt a similar strategy to pack nucleic acids based on positively charged protein domains

RD Requião, RL Carneiro, MH Moreira… - Scientific reports, 2020 - nature.com
Capsid proteins often present a positively charged arginine-rich sequence at their terminal
regions, which has a fundamental role in genome packaging and particle stability for some …

Packaging of DNA origami in viral capsids

I Kopatz, R Zalk, Y Levi-Kalisman, E Zlotkin-Rivkin… - Nanoscale, 2019 - pubs.rsc.org
Here we show the encapsulation of 35 nm diameter, nearly-spherical, DNA origami by self-
assembly of SV40-like (simian virus 40) particles. The self-assembly of this new type of …

Berberine chloride is an alphavirus inhibitor that targets nucleocapsid assembly

JJ Wan, RS Brown, M Kielian - MBio, 2020 - Am Soc Microbiol
Alphaviruses are enveloped positive-sense RNA viruses that can cause serious human
illnesses such as polyarthritis and encephalitis. Despite their widespread distribution and …

Studying viruses using solution X-ray scattering

D Khaykelson, U Raviv - Biophysical Reviews, 2020 - Springer
Viruses have been of interest to mankind since their discovery as small infectious agents in
the nineteenth century. Because many viruses cause diseases to humans and agriculture …

The sticky business of Alphavirus capsid–host interactions

CK Martin, P Yin, M Kielian - Trends in Microbiology, 2024 - cell.com
Alphaviruses are a serious threat to global health and can cause lethal encephalitic or
arthritogenic disease in humans and animals. As there are no licensed antivirals, it is critical …

How structural biology has changed our understanding of icosahedral viruses

M Comas-Garcia - Journal of Virology, 2024 - journals.asm.org
Cryo-electron microscopy and tomography have allowed us to unveil the remarkable
structure of icosahedral viruses. However, in the past few years, the idea that these viruses …