[HTML][HTML] Computational methods in drug discovery

SP Leelananda, S Lindert - Beilstein journal of organic …, 2016 - beilstein-journals.org
The process for drug discovery and development is challenging, time consuming and
expensive. Computer-aided drug discovery (CADD) tools can act as a virtual shortcut …

Computational methods in drug discovery

G Sliwoski, S Kothiwale, J Meiler, EW Lowe Jr… - Pharmacological …, 2014 - Elsevier
Computer-aided drug discovery/design methods have played a major role in the
development of therapeutically important small molecules for over three decades. These …

Towards reproducible computational drug discovery

N Schaduangrat, S Lampa, S Simeon… - Journal of …, 2020 - Springer
The reproducibility of experiments has been a long standing impediment for further scientific
progress. Computational methods have been instrumental in drug discovery efforts owing to …

PHASE: a new engine for pharmacophore perception, 3D QSAR model development, and 3D database screening: 1. Methodology and preliminary results

SL Dixon, AM Smondyrev, EH Knoll, SN Rao… - Journal of computer …, 2006 - Springer
We introduce PHASE, a highly flexible system for common pharmacophore identification
and assessment, 3D QSAR model development, and 3D database creation and searching …

Similarity-based virtual screening using 2D fingerprints

P Willett - Drug discovery today, 2006 - Elsevier
This paper summarizes recent work at the University of Sheffield on virtual screening
methods that use 2D fingerprint measures of structural similarity. A detailed comparison of a …

[引用][C] An Introduction to Chemoinformatics

AR Leach - 2007 - books.google.com
Chemoinformatics draws upon techniques from many disciplines including computer
science, mathematics, computational chemistry and data visualisation to tackle these …

Three-dimensional pharmacophore methods in drug discovery

AR Leach, VJ Gillet, RA Lewis… - Journal of medicinal …, 2010 - ACS Publications
The term pharmacophore has been used in medicinal chemistry for many years. The official
1998 IUPAC definition1 is as follows:“A pharmacophore is the ensemble of steric and …

Molecule-pharmacophore superpositioning and pattern matching in computational drug design

G Wolber, T Seidel, F Bendix, T Langer - Drug discovery today, 2008 - Elsevier
Three-dimensional (3D) pharmacophore modeling is a technique for describing the
interaction of a small molecule ligand with a macromolecular target. Since chemical features …

HIV‐1 NNRTIs: structural diversity, pharmacophore similarity, and impliations for drug design

P Zhan, X Chen, D Li, Z Fang… - Medicinal research …, 2013 - Wiley Online Library
Nonnucleoside reverse transcriptase inhibitors (NNRTIs) nowadays represent very potent
and most promising anti‐AIDS agents that specifically target the HIV‐1 reverse transcriptase …

Virtual screening and its integration with modern drug design technologies

AD Andricopulo, RVC Guido… - Current medicinal …, 2008 - ingentaconnect.com
Drug discovery is a highly complex and costly process, which demands integrated efforts in
several relevant aspects involving innovation, knowledge, information, technologies …