Confidence masks for genome DNA copy number variations in applications to HR-CGH array measurements
J Muñoz-Minjares, J Cabal-Aragón… - … Signal Processing and …, 2014 - Elsevier
The array-comparative genomic hybridization (aCGH) and next generation sequence
technologies enable cost-efficient high resolution detection of DNA copy number variations …
technologies enable cost-efficient high resolution detection of DNA copy number variations …
[PDF][PDF] Noise studies in measurements and estimates of stepwise changes in genome DNA chromosomal structures
Measurements using the high resolution array-comparative genomic hybridization (HR-
CGH) array are accompanied with large noise which strongly affects the estimates of the …
CGH) array are accompanied with large noise which strongly affects the estimates of the …
Critical evaluation of CNA estimators for DNA data using matching confidence masks and WGS technology
A big number of different estimators have been proposed during decades to detect the Copy
Number Alterations (CNA) in Deoxyribonucleic Acid (DNA) structures and indicate various …
Number Alterations (CNA) in Deoxyribonucleic Acid (DNA) structures and indicate various …
Improving estimates of the breakpoints in genome copy number alteration profiles with confidence masks
JM Minjares, YS Shmaliy - Biomedical Signal Processing and Control, 2017 - Elsevier
Chromosomal structural changes in human body known as copy number alterations (CNAs)
are often associated with disease such as cancer. Therefore, accurate estimation of the …
are often associated with disease such as cancer. Therefore, accurate estimation of the …
Matching Confidence Masks with Experts Annotations for Estimates of Chromosomal Copy Number Alterations
Structural aberrations (SAs), gains or losses in large segments of genomes, are associated
with several genetic disorders. The SAs are commonly called the copy number alterations …
with several genetic disorders. The SAs are commonly called the copy number alterations …
Jitter representation in SCNA breakpoints using asymmetric exponential power distribution
J Munoz-Minjares, YS Shmaliy… - 2017 14th …, 2017 - ieeexplore.ieee.org
Jitter is inherent to the breakpoints of measured genome somatic copy number alterations
(SCNAs). Therefore, an analysis of jitter is required to reduce errors in the SCNA estimation …
(SCNAs). Therefore, an analysis of jitter is required to reduce errors in the SCNA estimation …
Correcting estimates of DNA CNAs using improved confidence masks tuned to gold standard
J Muñoz‐Minjares, YS Shmaliy… - IET Signal Processing, 2019 - Wiley Online Library
Copy number alterations (CNAs) are hallmarks of cancer, which are now been routinely
measured by different techniques and used for diagnostic and prognostic purpose. Efficient …
measured by different techniques and used for diagnostic and prognostic purpose. Efficient …
Accurate jitter computation in CNA breakpoints using hybrid confidence masks with applications to SNP array probing
J Munoz-Minjares, YS Shmaliy… - IEEE …, 2017 - ieeexplore.ieee.org
Chromosomal structural changes known as copy number alterations-aberrations (CNAs)
result in gains or losses in copies of deoxyribonucleic acid sections, which are typically …
result in gains or losses in copies of deoxyribonucleic acid sections, which are typically …
[PDF][PDF] Matching confidence masks with experts annotations for estimates of chromosomal copy number alterations
JM Minjares, YS Shmaliy - J. Genet. Disord, 2017 - academia.edu
Structural aberrations (SAs), gains or losses in large segments of genomes, are associated
with several genetic disorders. The SAs are commonly called the copy number alterations …
with several genetic disorders. The SAs are commonly called the copy number alterations …
Improving approximation of jitter probability in the breakpoints of simulated copy number alterations
J Munoz-Minjares, YS Shmaliy… - 2016 13th …, 2016 - ieeexplore.ieee.org
We analyze and approximate the jitter distribution function in the breakpoints of the
measured genome copy number alterations (CNAs). The CNAs measured using the high …
measured genome copy number alterations (CNAs). The CNAs measured using the high …