Proteolytic Cleavage Mechanisms, Function, and “Omic” Approaches for a Near-Ubiquitous Posttranslational Modification

T Klein, U Eckhard, A Dufour, N Solis… - Chemical …, 2018 - ACS Publications
Proteases enzymatically hydrolyze peptide bonds in substrate proteins, resulting in a
widespread, irreversible posttranslational modification of the protein's structure and …

[HTML][HTML] Proteolytic post-translational modification of proteins: proteomic tools and methodology

LD Rogers, CM Overall - Molecular & Cellular Proteomics, 2013 - ASBMB
Proteolytic processing is a ubiquitous and irreversible post-translational modification
involving limited and highly specific hydrolysis of peptide and isopeptide bonds of a protein …

Multiplex peptide stable isotope dimethyl labeling for quantitative proteomics

PJ Boersema, R Raijmakers, S Lemeer… - Nature protocols, 2009 - nature.com
Accurate quantification of protein expression in biological systems is an increasingly
important part of proteomics research. Incorporation of differential stable isotopes in samples …

Protein termini and their modifications revealed by positional proteomics

G Marino, U Eckhard, CM Overall - ACS chemical biology, 2015 - ACS Publications
A myriad of co-and post-translational modifications occur at protein N-and C-termini,
resulting in an extra layer of proteome complexity and an additional source of protein …

Extent of N‐terminal modifications in cytosolic proteins from eukaryotes

A Martinez, JA Traverso, B Valot, M Ferro… - …, 2008 - Wiley Online Library
Most proteins in all organisms undergo crucial N‐terminal modifications involving N‐
terminal methionine excision, N‐α‐acetylation or N‐myristoylation (N‐Myr), or S …

Protein-inorganic hybrid nanoflowers as ultrasensitive electrochemical cytosensing Interfaces for evaluation of cell surface sialic acid

H Cao, DP Yang, D Ye, X Zhang, X Fang… - Biosensors and …, 2015 - Elsevier
The identification of biocompatible nanomaterials with high conductivities as sensing
interfaces is important in developing novel electrochemical cytosensors. We prepared a …

[HTML][HTML] Comprehensive analysis of human protein N-termini enables assessment of various protein forms

J Yeom, S Ju, YJ Choi, E Paek, C Lee - Scientific Reports, 2017 - nature.com
Various forms of protein (proteoforms) are generated by genetic variations, alternative
splicing, alternative translation initiation, co-or post-translational modification and …

N-terminomics–its past and recent advancements

P Kaushal, C Lee - Journal of Proteomics, 2021 - Elsevier
N-terminomics is a rapidly evolving branch of proteomics that encompasses the study of
protein N-terminal sequence. A proteome-wide collection of such sequences has been …

Hydrophobic tagging-assisted N-termini enrichment for in-depth N-terminome analysis

L Chen, Y Shan, Y Weng, Z Sui, X Zhang… - Analytical …, 2016 - ACS Publications
The analysis of protein N-termini is of great importance for understanding the protein
function and elucidating the proteolytic processing. Herein, we develop a negative …

N‐terminomics and proteogenomics, getting off to a good start

EM Hartmann, J Armengaud - Proteomics, 2014 - Wiley Online Library
Proteogenomics consists of the annotation or reannotation of protein‐coding nucleic acid
sequences based on the empirical observation of their gene products. While functional …