[HTML][HTML] Circular RNA-protein interactions: functions, mechanisms, and identification

A Huang, H Zheng, Z Wu, M Chen, Y Huang - Theranostics, 2020 - ncbi.nlm.nih.gov
Circular RNAs (circRNAs) are covalently closed, endogenous RNAs with no 5′ end caps or
3′ poly (A) tails. These RNAs are expressed in tissue-specific, cell-specific, and …

Mechanisms and functions of long non-coding RNAs at multiple regulatory levels

X Zhang, W Wang, W Zhu, J Dong, Y Cheng… - International journal of …, 2019 - mdpi.com
Long non-coding (lnc) RNAs are non-coding RNAs longer than 200 nt. lncRNAs primarily
interact with mRNA, DNA, protein, and miRNA and consequently regulate gene expression …

IRES-mediated cap-independent translation, a path leading to hidden proteome

Y Yang, Z Wang - Journal of molecular cell biology, 2019 - academic.oup.com
Most eukaryotic mRNAs are translated in a cap-dependent fashion; however, under stress
conditions, the cap-independent translation driven by internal ribosomal entry sites (IRESs) …

A compendium of RNA-binding motifs for decoding gene regulation

D Ray, H Kazan, KB Cook, MT Weirauch… - Nature, 2013 - nature.com
RNA-binding proteins are key regulators of gene expression, yet only a small fraction have
been functionally characterized. Here we report a systematic analysis of the RNA motifs …

Identification of microRNA-124 as a major regulator of enhanced endothelial cell glycolysis in pulmonary arterial hypertension via PTBP1 (polypyrimidine tract binding …

P Caruso, BJ Dunmore, K Schlosser, S Schoors… - Circulation, 2017 - Am Heart Assoc
Background: Pulmonary arterial hypertension (PAH) is characterized by abnormal growth
and enhanced glycolysis of pulmonary artery endothelial cells. However, the mechanisms …

Alternative pre-mRNA splicing regulation in cancer: pathways and programs unhinged

CJ David, JL Manley - Genes & development, 2010 - genesdev.cshlp.org
Alternative splicing of mRNA precursors is a nearly ubiquitous and extremely flexible point of
gene control in humans. It provides cells with the opportunity to create protein isoforms of …

The role of the 3'untranslated region in post-transcriptional regulation of protein expression in mammalian cells.

E Matoulkova, E Michalova, B Vojtesek, R Hrstka - RNA biology, 2012 - Taylor & Francis
The untranslated regions (UTRs) at the 3'end of mRNA transcripts contain important
sequences that influence the fate of mRNA and thus proteosynthesis. In this review, we …

[HTML][HTML] HuR function in disease

S Srikantan, M Gorospe - Frontiers in bioscience (Landmark edition …, 2012 - ncbi.nlm.nih.gov
The cytoplasmic events that control mammalian gene expression, primarily mRNA stability
and translation, potently influence the cellular response to internal and external signals. The …

Cold shock proteins: from cellular mechanisms to pathophysiology and disease

JA Lindquist, PR Mertens - Cell Communication and Signaling, 2018 - Springer
Cold shock proteins are multifunctional RNA/DNA binding proteins, characterized by the
presence of one or more cold shock domains. In humans, the best characterized members of …

To localize or not to localize: mRNA fate is in 3′ UTR ends

C Andreassi, A Riccio - Trends in cell biology, 2009 - cell.com
Translation of localized mRNA is a fast and efficient way of reacting to extracellular stimuli
with the added benefit of providing spatial resolution to the cellular response. The efficacy of …