Intracellular innate immune surveillance devices in plants and animals

JDG Jones, RE Vance, JL Dangl - Science, 2016 - science.org
BACKGROUND Pathogens cause agricultural devastation and huge economic losses. Up to
30% of our crops are lost before or after harvest to pathogens and pests, wasting water and …

Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases

OK Tørresen, B Star, P Mier… - Nucleic acids …, 2019 - academic.oup.com
The widespread occurrence of repetitive stretches of DNA in genomes of organisms across
the tree of life imposes fundamental challenges for sequencing, genome assembly, and …

A high-resolution mRNA expression time course of embryonic development in zebrafish

RJ White, JE Collins, IM Sealy, N Wali, CM Dooley… - elife, 2017 - elifesciences.org
We have produced an mRNA expression time course of zebrafish development across 18
time points from 1 cell to 5 days post-fertilisation sampling individual and pools of embryos …

Targeting the microglial NLRP3 inflammasome and its role in Parkinson's disease

ME Haque, M Akther, M Jakaria, IS Kim… - Movement …, 2020 - Wiley Online Library
Excessive activation of microglia and subsequent release of proinflammatory cytokines play
a crucial role in neuroinflammation and neurodegeneration in Parkinson's disease (PD) …

Transposable elements drive the evolution of metazoan zinc finger genes

JN Wells, NC Chang, J McCormick… - Genome …, 2023 - genome.cshlp.org
Cys2-His2 zinc finger genes (ZNFs) form the largest family of transcription factors in
metazoans. ZNF evolution is highly dynamic and characterized by the rapid expansion and …

A comparative overview of the intracellular guardians of plants and animals: NLRs in innate immunity and beyond

Z Duxbury, C Wu, P Ding - Annual review of plant biology, 2021 - annualreviews.org
Nucleotide-binding domain leucine-rich repeat receptors (NLRs) play important roles in the
innate immune systems of both plants and animals. Recent breakthroughs in NLR …

Pattern recognition receptors in zebrafish provide functional and evolutionary insight into innate immune signaling pathways

Y Li, Y Li, X Cao, X Jin, T Jin - Cellular & molecular immunology, 2017 - nature.com
Pattern recognition receptors (PRRs) and their signaling pathways have essential roles in
recognizing various components of pathogens as well as damaged cells and triggering …

Evolutionary convergence and divergence in NLR function and structure

E Meunier, P Broz - Trends in immunology, 2017 - cell.com
The recognition of cellular damage caused by either pathogens or abiotic stress is essential
for host defense in all forms of life in the plant and animal kingdoms. The NOD-like receptors …

The zebrafish NLRP3 inflammasome has functional roles in ASC-dependent interleukin-1β maturation and gasdermin E–mediated pyroptosis

JY Li, YY Wang, T Shao, DD Fan, AF Lin… - Journal of Biological …, 2020 - ASBMB
The NLR family pyrin domain containing 3 (NLRP3) inflammasome is one of the best-
characterized inflammasomes in humans and other mammals. However, knowledge about …

Unfinished business: evolution of the MHC and the adaptive immune system of jawed vertebrates

J Kaufman - Annual review of immunology, 2018 - annualreviews.org
The major histocompatibility complex (MHC) is a large genetic region with many genes,
including the highly polymorphic classical class I and II genes that play crucial roles in …