Genome interpretation using in silico predictors of variant impact
Estimating the effects of variants found in disease driver genes opens the door to
personalized therapeutic opportunities. Clinical associations and laboratory experiments …
personalized therapeutic opportunities. Clinical associations and laboratory experiments …
Cancer stem cell regulated phenotypic plasticity protects metastasized cancer cells from ferroptosis
Cancer cells display phenotypic equilibrium between the stem-like and differentiated states
during neoplastic homeostasis. The functional and mechanistic implications of this …
during neoplastic homeostasis. The functional and mechanistic implications of this …
[HTML][HTML] A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA
M Cesana, D Cacchiarelli, I Legnini, T Santini… - Cell, 2011 - cell.com
Recently, a new regulatory circuitry has been identified in which RNAs can crosstalk with
each other by competing for shared microRNAs. Such competing endogenous RNAs …
each other by competing for shared microRNAs. Such competing endogenous RNAs …
Computational identification of transcriptional regulatory elements in DNA sequence
D GuhaThakurta - Nucleic acids research, 2006 - academic.oup.com
Identification and annotation of all the functional elements in the genome, including genes
and the regulatory sequences, is a fundamental challenge in genomics and computational …
and the regulatory sequences, is a fundamental challenge in genomics and computational …
On the immortality of television sets:“function” in the human genome according to the evolution-free gospel of ENCODE
A recent slew of ENCyclopedia Of DNA Elements (ENCODE) Consortium publications,
specifically the article signed by all Consortium members, put forward the idea that more …
specifically the article signed by all Consortium members, put forward the idea that more …
Atheroprotective communication between endothelial cells and smooth muscle cells through miRNAs
E Hergenreider, S Heydt, K Tréguer, T Boettger… - Nature cell …, 2012 - nature.com
The shear-responsive transcription factor Krüppel-like factor 2 (KLF2) is a critical regulator of
endothelial gene expression patterns induced by atheroprotective flow. As microRNAs …
endothelial gene expression patterns induced by atheroprotective flow. As microRNAs …
LincRNA-Gm4419 knockdown ameliorates NF-κB/NLRP3 inflammasome-mediated inflammation in diabetic nephropathy
H Yi, R Peng, L Zhang, Y Sun, H Peng, H Liu, L Yu… - Cell death & …, 2017 - nature.com
Diabetic nephropathy (DN) as the primary cause of end-stage kidney disease is a common
complication of diabetes. Recent researches have shown the activation of nuclear factor …
complication of diabetes. Recent researches have shown the activation of nuclear factor …
MatInspector and beyond: promoter analysis based on transcription factor binding sites
K Cartharius, K Frech, K Grote, B Klocke… - …, 2005 - academic.oup.com
Motivation: Promoter analysis is an essential step on the way to identify regulatory networks.
A prerequisite for successful promoter analysis is the prediction of potential transcription …
A prerequisite for successful promoter analysis is the prediction of potential transcription …
NALP1 in Vitiligo-Associated Multiple Autoimmune Disease
Y Jin, CM Mailloux, K Gowan, SL Riccardi… - … England Journal of …, 2007 - Mass Medical Soc
Background Autoimmune and autoinflammatory diseases involve interactions between
genetic risk factors and environmental triggers. We searched for a gene on chromosome …
genetic risk factors and environmental triggers. We searched for a gene on chromosome …
NF-κB–YY1–miR-29 regulatory circuitry in skeletal myogenesis and rhabdomyosarcoma
Studies support the importance of microRNAs in physiological and pathological processes.
Here we describe the regulation and function of miR-29 in myogenesis and …
Here we describe the regulation and function of miR-29 in myogenesis and …