Control of inducible gene expression links cohesin to hematopoietic progenitor self-renewal and differentiation

S Cuartero, FD Weiss, G Dharmalingam, Y Guo… - Nature …, 2018 - nature.com
Cohesin is important for 3D genome organization. Nevertheless, even the complete removal
of cohesin has surprisingly little impact on steady-state gene transcription and enhancer …

Quantification of network structural dissimilarities

TA Schieber, L Carpi, A Díaz-Guilera… - Nature …, 2017 - nature.com
Identifying and quantifying dissimilarities among graphs is a fundamental and challenging
problem of practical importance in many fields of science. Current methods of network …

Genetic correlation network prediction of forest soil microbial functional organization

B Ma, K Zhao, X Lv, W Su, Z Dai, JA Gilbert… - The ISME …, 2018 - academic.oup.com
Soil ecological functions are largely determined by the activities of soil microorganisms,
which, in turn, are regulated by relevant interactions between genes and their corresponding …

Efficient methods for the distance-based critical node detection problem in complex networks

GU Alozie, A Arulselvan, K Akartunalı… - Computers & Operations …, 2021 - Elsevier
An important problem in network survivability assessment is the identification of critical
nodes. The distance-based critical node detection problem addresses the issues of internal …

Classification and verification of handwritten signatures with time causal information theory quantifiers

OA Rosso, R Ospina, AC Frery - PloS one, 2016 - journals.plos.org
We present a new approach for handwritten signature classification and verification based
on descriptors stemming from time causal information theory. The proposal uses the …

Netpro2vec: a graph embedding framework for biomedical applications

I Manipur, M Manzo, I Granata… - IEEE/ACM …, 2021 - ieeexplore.ieee.org
The ever-increasing importance of structured data in different applications, especially in the
biomedical field, has driven the need for reducing its complexity through projections into a …

Statistical physics of network structure and information dynamics

A Ghavasieh, M De Domenico - Journal of Physics: Complexity, 2022 - iopscience.iop.org
In the last two decades, network science has proven to be an invaluable tool for the analysis
of empirical systems across a wide spectrum of disciplines, with applications to data …

Structural robustness and vulnerability of networks

AC Schwarze, J Jiang, J Wray, MA Porter - arXiv preprint arXiv …, 2024 - arxiv.org
Networks are useful descriptions of the structure of many complex systems. Unsurprisingly, it
is thus important to analyze the robustness of networks in many scientific disciplines. In …

Time series characterization via horizontal visibility graph and Information Theory

BA Gonçalves, L Carpi, OA Rosso… - Physica A: Statistical …, 2016 - Elsevier
Complex networks theory have gained wider applicability since methods for transformation
of time series to networks were proposed and successfully tested. In the last few years …

Analysis and classification of SAR textures using information theory

ETC Chagas, AC Frery, OA Rosso… - IEEE Journal of …, 2020 - ieeexplore.ieee.org
The use of Bandt–Pompe probability distributions and descriptors of information theory has
been presenting satisfactory results with low computational cost in the time series analysis …