Bacterial quorum-sensing network architectures

WL Ng, BL Bassler - Annual review of genetics, 2009 - annualreviews.org
Quorum sensing is a cell-cell communication process in which bacteria use the production
and detection of extracellular chemicals called autoinducers to monitor cell population …

Responding to chemical gradients: bacterial chemotaxis

V Sourjik, NS Wingreen - Current opinion in cell biology, 2012 - Elsevier
Chemotaxis allows bacteria to follow gradients of nutrients and other environmental stimuli.
The bacterium Escherichia coli performs chemotaxis via a run-and-tumble strategy in which …

[图书][B] An introduction to systems biology: design principles of biological circuits

U Alon - 2019 - api.taylorfrancis.com
Praise for the first edition:… superb, beautifully written and organized work that takes an
engineering approach to systems biology. Alon provides nicely written appendices to …

[图书][B] Physical biology of the cell

R Phillips, J Kondev, J Theriot, H Garcia - 2012 - taylorfrancis.com
Physical Biology of the Cell is a textbook for a first course in physical biology or biophysics
for undergraduate or graduate students. It maps the huge and complex landscape of cell …

Modeling the chemotactic response of Escherichia coli to time-varying stimuli

Y Tu, TS Shimizu, HC Berg - Proceedings of the National …, 2008 - National Acad Sciences
In their natural environment, cells need to extract useful information from complex temporal
signals that vary over a wide range of intensities and time scales. Here, we study how such …

[HTML][HTML] Ligand-induced asymmetry in histidine sensor kinase complex regulates quorum sensing

MB Neiditch, MJ Federle, AJ Pompeani, RC Kelly… - Cell, 2006 - cell.com
Bacteria sense their environment using receptors of the histidine sensor kinase family, but
how kinase activity is regulated by ligand binding is not well understood. Autoinducer-2 (AI …

Logarithmic sensing in Escherichia coli bacterial chemotaxis

YV Kalinin, L Jiang, Y Tu, M Wu - Biophysical journal, 2009 - cell.com
We studied the response of swimming Escherichia coli (E. coli) bacteria in a comprehensive
set of well-controlled chemical concentration gradients using a newly developed microfluidic …

A modular gradient‐sensing network for chemotaxis in Escherichia coli revealed by responses to time‐varying stimuli

TS Shimizu, Y Tu, HC Berg - Molecular systems biology, 2010 - embopress.org
The Escherichia coli chemotaxis‐signaling pathway computes time derivatives of
chemoeffector concentrations. This network features modules for signal …

Bacterial strategies for chemotaxis response

A Celani, M Vergassola - Proceedings of the National …, 2010 - National Acad Sciences
Regular environmental conditions allow for the evolution of specifically adapted responses,
whereas complex environments usually lead to conflicting requirements upon the …

Accuracy of direct gradient sensing by single cells

RG Endres, NS Wingreen - Proceedings of the National …, 2008 - National Acad Sciences
Many types of cells are able to accurately sense shallow gradients of chemicals across their
diameters, allowing the cells to move toward or away from chemical sources. This …