Stochastic models of intracellular calcium signals

S Rüdiger - Physics Reports, 2014 - Elsevier
Cellular signaling operates in a noisy environment shaped by low molecular concentrations
and cellular heterogeneity. For calcium release through intracellular channels–one of the …

[HTML][HTML] Towards the physics of calcium signalling in plants

TV Martins, MJ Evans, HC Woolfenden, RJ Morris - Plants, 2013 - mdpi.com
Calcium is an abundant element with a wide variety of important roles within cells. Calcium
ions are inter-and intra-cellular messengers that are involved in numerous signalling …

Luminal transport through intact endoplasmic reticulum limits the magnitude of localized Ca2+ signals

CC Crapart, ZC Scott, T Konno… - Proceedings of the …, 2024 - National Acad Sciences
The endoplasmic reticulum (ER) forms an interconnected network of tubules stretching
throughout the cell. Understanding how ER functionality relies on its structural organization …

A stochastic model of calcium puffs based on single-channel data

P Cao, G Donovan, M Falcke, J Sneyd - Biophysical journal, 2013 - cell.com
Calcium puffs are local transient Ca 2+ releases from internal Ca 2+ stores such as the
endoplasmic reticulum or the sarcoplasmic reticulum. Such release occurs through a cluster …

Analyzing and Quantifying the Gain-of-Function Enhancement of IP3 Receptor Gating by Familial Alzheimer's Disease-Causing Mutants in Presenilins

DOD Mak, KH Cheung, P Toglia… - PLOS computational …, 2015 - journals.plos.org
Familial Alzheimer's disease (FAD)-causing mutant presenilins (PS) interact with inositol 1,
4, 5-trisphosphate (IP3) receptor (IP3R) Ca2+ release channels resulting in enhanced IP3R …

Intracellular calcium stores mediate metaplasticity at hippocampal dendritic spines

G Mahajan, S Nadkarni - The Journal of physiology, 2019 - Wiley Online Library
Key points Calcium (Ca2+) entry mediated by NMDA receptors is considered central to the
induction of activity‐dependent synaptic plasticity in hippocampal area CA1; this description …

Particle-based multiscale modeling of calcium puff dynamics

U Dobramysl, S Rüdiger, R Erban - Multiscale Modeling & Simulation, 2016 - SIAM
Intracellular calcium is regulated in part by the release of Ca ^2+ ions from the endoplasmic
reticulum via inositol-4, 5-triphosphate receptor (IP _3 R) channels (among other …

Termination of calcium puffs and coupled closings of inositol trisphosphate receptor channels

SM Wiltgen, GD Dickinson, D Swaminathan, I Parker - Cell Calcium, 2014 - Elsevier
Calcium puffs are localized Ca 2+ signals mediated by Ca 2+ release from the endoplasmic
reticulum (ER) through clusters of inositol trisphosphate receptor (IP 3 R) channels. The …

Analyzing and modeling the kinetics of amyloid beta pores associated with Alzheimer's disease pathology

G Ullah, A Demuro, I Parker, JE Pearson - PloS one, 2015 - journals.plos.org
Amyloid beta (Aβ) oligomers associated with Alzheimer's disease (AD) form Ca2+-
permeable plasma membrane pores, leading to a disruption of the otherwise well-controlled …

Elementary intracellular Ca signals approximated as a transition of release channel system from a metastable state

G Veron, VA Maltsev, MD Stern… - Journal of Applied Physics, 2023 - pubs.aip.org
Cardiac muscle contraction is initiated by an elementary Ca signal (called Ca spark) which
is achieved by collective action of Ca release channels in a cluster. The mechanism of this …