Dynamics and function of DNA methylation in plants
DNA methylation is a conserved epigenetic modification that is important for gene regulation
and genome stability. Aberrant patterns of DNA methylation can lead to plant developmental …
and genome stability. Aberrant patterns of DNA methylation can lead to plant developmental …
Long noncoding RNAs in plants
AT Wierzbicki, T Blevins… - Annual Review of Plant …, 2021 - annualreviews.org
Plants have an extraordinary diversity of transcription machineries, including five nuclear
DNA-dependent RNA polymerases. Four of these enzymes are dedicated to the production …
DNA-dependent RNA polymerases. Four of these enzymes are dedicated to the production …
RNA-directed DNA methylation: an epigenetic pathway of increasing complexity
RNA-directed DNA methylation (RdDM) is the major small RNA-mediated epigenetic
pathway in plants. RdDM requires a specialized transcriptional machinery that comprises …
pathway in plants. RdDM requires a specialized transcriptional machinery that comprises …
Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis
DNA methylation occurs in CG and non-CG sequence contexts. Non-CG methylation is
abundant in plants and is mediated by CHROMOMETHYLASE (CMT) and DOMAINS …
abundant in plants and is mediated by CHROMOMETHYLASE (CMT) and DOMAINS …
[HTML][HTML] The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin
Nucleosome remodelers of the DDM1/Lsh family are required for DNA methylation of
transposable elements, but the reason for this is unknown. How DDM1 interacts with other …
transposable elements, but the reason for this is unknown. How DDM1 interacts with other …
Long non-coding RNAs and their functions in plants
JA Chekanova - Current opinion in plant biology, 2015 - Elsevier
Highlights•Plant lncRNAs participate in regulation of transcription, splicing, and nuclear
structure.•In flowering, multiple lncRNAs act in silencing of FLC via diverse …
structure.•In flowering, multiple lncRNAs act in silencing of FLC via diverse …
Classification and comparison of small RNAs from plants
MJ Axtell - Annual review of plant biology, 2013 - annualreviews.org
Regulatory small RNAs, which range in size from 20 to 24 nucleotides, are ubiquitous
components of endogenous plant transcriptomes, as well as common responses to …
components of endogenous plant transcriptomes, as well as common responses to …
The Diversity, Biogenesis, and Activities of Endogenous Silencing Small RNAs in Arabidopsis
NG Bologna, O Voinnet - Annual review of plant biology, 2014 - annualreviews.org
In eukaryotic RNA silencing, RNase-III classes of enzymes in the Dicer family process
double-stranded RNA of cellular or exogenous origin into small-RNA (sRNA) molecules …
double-stranded RNA of cellular or exogenous origin into small-RNA (sRNA) molecules …
Control of chromatin structure by long noncoding RNA
G Böhmdorfer, AT Wierzbicki - Trends in cell biology, 2015 - cell.com
Long noncoding RNA (lncRNA) is a pivotal factor regulating various aspects of genome
activity. Genome regulation via DNA methylation and post-translational histone …
activity. Genome regulation via DNA methylation and post-translational histone …
The initiation of epigenetic silencing of active transposable elements is triggered by RDR6 and 21-22 nucleotide small interfering RNAs
Transposable elements (TEs) are mobile fragments of DNA that are repressed in both plant
and animal genomes through the epigenetic inheritance of repressed chromatin and …
and animal genomes through the epigenetic inheritance of repressed chromatin and …