Application of microsatellite genotyping by sequencing (SSR-GBS) to measure genetic diversity of the East African Oreochromis niloticus

PD Tibihika, M Curto, E Dornstauder-Schrammel… - Conservation …, 2019 - Springer
Microsatellites play an important role when investigating population and ecological genetics,
although high effort in development and genotyping constitute a technical constraint and …

Application of a SSR‐GBS marker system on investigation of European Hedgehog species and their hybrid zone dynamics

M Curto, S Winter, A Seiter, L Schmid… - Ecology and …, 2019 - Wiley Online Library
By applying second‐generation sequencing technologies to microsatellite genotyping,
sequence information is produced which can result in high‐resolution population genetics …

Evidence for multiple introductions of an invasive wild bee species currently under rapid range expansion in Europe

J Lanner, F Gstöttenmayer, M Curto, B Geslin… - BMC Ecology and …, 2021 - Springer
Background Invasive species are increasingly driving biodiversity decline, and knowledge of
colonization dynamics, including both drivers and dispersal modes, are important to prevent …

Fast sequence-based microsatellite genotyping development workflow

O Lepais, E Chancerel, C Boury, F Salin, A Manicki… - PeerJ, 2020 - peerj.com
Application of high-throughput sequencing technologies to microsatellite genotyping
(SSRseq) has been shown to remove many of the limitations of electrophoresis-based …

The genomic basis and environmental correlates of local adaptation in the Atlantic horse mackerel (Trachurus trachurus)

AP Fuentes‐Pardo, ED Farrell… - Evolutionary …, 2023 - Wiley Online Library
Understanding how populations adapt to their environment is increasingly important to
prevent biodiversity loss due to overexploitation and climate change. Here we studied the …

A baseline for the genetic stock identification of Atlantic herring, Clupea harengus, in ICES Divisions 6.a, 7.b–c

ED Farrell, L Andersson… - Royal Society …, 2022 - royalsocietypublishing.org
Atlantic herring in International Council for Exploration of the Sea (ICES) Divisions 6. a, 7. b–
c comprises at least three populations, distinguished by temporal and spatial differences in …

Population genomics and phylogeography of a benthic coastal shark (Scyliorhinus canicula) using 2b-RAD single nucleotide polymorphisms

A Manuzzi, L Zane, A Muñoz-Merida… - Biological Journal of …, 2019 - academic.oup.com
The existence of strong genetic structure is expected in species with limited ability to
disperse and philopatric behaviour. These life-history traits are found in many small benthic …

Genetic diversity and genetic structure of Acer monspessulanum L. across Zagros forests of Iran using molecular markers

B Motahari, N Shabanian, MS Rahmani… - Gene, 2021 - Elsevier
Acer monspessulanum L. is an important tree species found in the temperate Zagros forests
of Iran. Despite its importance, the long-term persistence of its small and fragmented …

CHIIMP: An automated high‐throughput microsatellite genotyping platform reveals greater allelic diversity in wild chimpanzees

HJ Barbian, AJ Connell, AN Avitto… - Ecology and …, 2018 - Wiley Online Library
Short tandem repeats (STR s), also known as microsatellites, are commonly used to
noninvasively genotype wild‐living endangered species, including African apes. Until …

Reveal the Population Genetic Characteristics of Bombay Duck (Harpadon nehereus) in Coastal Waters of China with Genotyping-by-Sequencing Technique

T Yang, X Huang, Y Jiang - Journal of Ocean University of China, 2022 - Springer
Bombay duck (Harpadon nehereus) is an economically important species in the estuarine
and coastal offshore waters of the Indo-West Pacific. This study aims to reveal the genome …