[HTML][HTML] Genome evolution in fungal plant pathogens: looking beyond the two-speed genome model
The interaction of pathogens with their hosts creates strong reciprocal selection pressures.
Pathogens often deploy an arsenal of small proteins called effectors that manipulate the …
Pathogens often deploy an arsenal of small proteins called effectors that manipulate the …
The dynamic fungal genome: polyploidy, aneuploidy and copy number variation in response to stress
P Vande Zande, X Zhou… - Annual review of …, 2023 - annualreviews.org
Fungal species have dynamic genomes and often exhibit genomic plasticity in response to
stress. This genome plasticity often comes with phenotypic consequences that affect fitness …
stress. This genome plasticity often comes with phenotypic consequences that affect fitness …
A 19-isolate reference-quality global pangenome for the fungal wheat pathogen Zymoseptoria tritici
Background The gene content of a species largely governs its ecological interactions and
adaptive potential. A species is therefore defined by both core genes shared between all …
adaptive potential. A species is therefore defined by both core genes shared between all …
Recent transposable element bursts are associated with the proximity to genes in a fungal plant pathogen
U Oggenfuss, D Croll - PLoS Pathogens, 2023 - journals.plos.org
The activity of transposable elements (TEs) contributes significantly to pathogen genome
evolution. TEs often destabilize genome integrity but may also confer adaptive variation in …
evolution. TEs often destabilize genome integrity but may also confer adaptive variation in …
Major proliferation of transposable elements shaped the genome of the soybean rust pathogen Phakopsora pachyrhizi
With> 7000 species the order of rust fungi has a disproportionately large impact on
agriculture, horticulture, forestry and foreign ecosystems. The infectious spores are typically …
agriculture, horticulture, forestry and foreign ecosystems. The infectious spores are typically …
A devil's bargain with transposable elements in plant pathogens
Transposable elements (TEs) spread in genomes through self-copying mechanisms and are
a major cause of genome expansions. Plant pathogens have finely tuned the expression of …
a major cause of genome expansions. Plant pathogens have finely tuned the expression of …
A dispensable paralog of succinate dehydrogenase subunit C mediates standing resistance towards a subclass of SDHI fungicides in Zymoseptoria tritici
D Steinhauer, M Salat, R Frey, A Mosbach… - PLoS …, 2019 - journals.plos.org
Succinate dehydrogenase inhibitor (SDHI) fungicides are widely used for the control of a
broad range of fungal diseases. This has been the most rapidly expanding fungicide group …
broad range of fungal diseases. This has been the most rapidly expanding fungicide group …
Retrotransposons as pathogenicity factors of the plant pathogenic fungus Botrytis cinerea
Background Retrotransposons are genetic elements inducing mutations in all domains of
life. Despite their detrimental effect, retrotransposons can become temporarily active during …
life. Despite their detrimental effect, retrotransposons can become temporarily active during …
Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen
H Chen, R King, D Smith, C Bayon, T Ashfield… - BMC biology, 2023 - Springer
Background Studying genomic variation in rapidly evolving pathogens potentially enables
identification of genes supporting their “core biology”, being present, functional and …
identification of genes supporting their “core biology”, being present, functional and …
Genomic rearrangements generate hypervariable mini-chromosomes in host-specific isolates of the blast fungus
T Langner, A Harant, LB Gomez-Luciano… - PLoS …, 2021 - journals.plos.org
Supernumerary mini-chromosomes–a unique type of genomic structural variation–have
been implicated in the emergence of virulence traits in plant pathogenic fungi. However, the …
been implicated in the emergence of virulence traits in plant pathogenic fungi. However, the …