An overview of topic modeling and its current applications in bioinformatics
L Liu, L Tang, W Dong, S Yao, W Zhou - SpringerPlus, 2016 - Springer
Background With the rapid accumulation of biological datasets, machine learning methods
designed to automate data analysis are urgently needed. In recent years, so-called topic …
designed to automate data analysis are urgently needed. In recent years, so-called topic …
Identifying miRNAs, targets and functions
Abstract microRNAs (miRNAs) are small endogenous non-coding RNAs that function as the
universal specificity factors in post-transcriptional gene silencing. Discovering miRNAs …
universal specificity factors in post-transcriptional gene silencing. Discovering miRNAs …
Latent Dirichlet allocation (LDA) and topic modeling: models, applications, a survey
Topic modeling is one of the most powerful techniques in text mining for data mining, latent
data discovery, and finding relationships among data and text documents. Researchers …
data discovery, and finding relationships among data and text documents. Researchers …
A network approach to topic models
One of the main computational and scientific challenges in the modern age is to extract
useful information from unstructured texts. Topic models are one popular machine-learning …
useful information from unstructured texts. Topic models are one popular machine-learning …
MicroRNA regulons in tumor microenvironment
HI Suzuki, A Katsura, H Matsuyama, K Miyazono - Oncogene, 2015 - nature.com
Cancer initiation and progression are defined by the behavior of cancer cells per se and the
development of tumor tissues, both of which are modulated by crosstalk between cancer …
development of tumor tissues, both of which are modulated by crosstalk between cancer …
Evaluation of clustering and topic modeling methods over health-related tweets and emails
Background Internet provides different tools for communicating with patients, such as social
media (eg, Twitter) and email platforms. These platforms provided new data sources to shed …
media (eg, Twitter) and email platforms. These platforms provided new data sources to shed …
Identification of microRNA-regulated gene networks by expression analysis of target genes
MicroRNAs (miRNAs) and transcription factors control eukaryotic cell proliferation,
differentiation, and metabolism through their specific gene regulatory networks. However …
differentiation, and metabolism through their specific gene regulatory networks. However …
High-reproducibility and high-accuracy method for automated topic classification
Much of human knowledge sits in large databases of unstructured text. Leveraging this
knowledge requires algorithms that extract and record metadata on unstructured text …
knowledge requires algorithms that extract and record metadata on unstructured text …
[HTML][HTML] MicroRNA-296-5p (miR-296-5p) functions as a tumor suppressor in prostate cancer by directly targeting Pin1
KH Lee, FC Lin, TI Hsu, JT Lin, JH Guo, CH Tsai… - … et Biophysica Acta (BBA …, 2014 - Elsevier
Upregulation of Pin1 was shown to advance the functioning of several oncogenic pathways.
It was recently shown that Pin1 is potentially an excellent prognostic marker and can also …
It was recently shown that Pin1 is potentially an excellent prognostic marker and can also …
Topic model-based recommender systems and their applications to cold-start problems
M Kawai, H Sato, T Shiohama - Expert Systems with Applications, 2022 - Elsevier
Recommender systems provide information and items that match a user's preference. This
study proposes hybrid recommender models that use content-based filtering and latent …
study proposes hybrid recommender models that use content-based filtering and latent …