Genomics analyses reveal unique classification, population structure and novel allele of neo-tetraploid rice

H Yu, Q Li, Y Li, H Yang, Z Lu, J Wu, Z Zhang… - Rice, 2021 - Springer
Background Neo-tetraploid rice (NTR) is a useful new germplasm that developed from the
descendants of the autotetraploid rice (ATR) hybrids. NTR showed improved fertility and …

QTL mapping and candidate gene analysis of low temperature germination in rice (Oryza sativa L.) using a genome wide association study

F Mao, D Wu, F Lu, X Yi, Y Gu, B Liu, F Liu, T Tang… - PeerJ, 2022 - peerj.com
Low temperature germination (LTG) is a key agronomic trait in rice (Oryza sativa L.).
However, the genetic basis of natural variation for LTG is largely unknown. Here, a genome …

Evaluation of Indian Durum Wheat Genotypes for Yield and Quality Traits Using Additive Main-Effects and Multiplicative Interaction (AMMI) Biplot Analysis under …

A Gautam, S Venkata Sai Prasad… - … breeding, genetics and …, 2023 - cgspace.cgiar.org
The abrupt increase of temperatures during and after the flowering period of wheat is
defined as terminal heat stress, and it causes severe reductions in productivity. One hundred …

Cytological, transcriptome and miRNome temporal landscapes decode enhancement of rice grain size

A Mahto, A Yadav, A PV, SK Parida, AK Tyagi… - BMC biology, 2023 - Springer
Background Rice grain size (GS) is an essential agronomic trait. Though several genes and
miRNA modules influencing GS are known and seed development transcriptomes analyzed …

Rice Pangenome Genotyping Array: an efficient genotyping solution for pangenome‐based accelerated genetic improvement in rice

A Daware, A Malik, R Srivastava, D Das… - The Plant …, 2023 - Wiley Online Library
The advent of the pangenome era has unraveled previously unknown genetic variation
existing within diverse crop plants, including rice. This untapped genetic variation is …

[HTML][HTML] Whole genome resequencing unveils low-temperature stress tolerance specific genomic variations in jute (Corchorus sp.)

A Ganguly, S Amin, FT Chowdhury, H Khan… - Journal of Genetic …, 2024 - Elsevier
Abstract Jute (Corchorus sp.), a commercially important and eco-friendly crop, is widely
cultivated in Bangladesh, India, and China. Some varieties of this tropical plant such as the …

Genetic Diversity and Breeding Signatures for Regional Indica Rice Improvement in Guangdong of Southern China

Y Hang, L Yue, S Bingrui, L Qing, M Xingxue, J Liqun… - Rice, 2023 - Springer
As the pioneer of the Green Revolution in China, Guangdong province witnessed the
improvement and spread of semi-dwarf Xian/Indica rice cultivars and possessed diverse rice …

Combining a Genome-Wide Association Study and Gene-Based Haplotype Analysis to Identify Candidate Genes for Cold Tolerance at the Bud Burst Stage in Rice …

W Chen, P Li, G Zhang, K Chen, Z Li, J Xu - Agronomy, 2023 - mdpi.com
As a temperature-loving crop, rice is sensitive to low temperatures. With the popularization of
direct-seeded rice, cold tolerance (CT) at the bud burst stage has become an important …

Explore the genetics of weedy traits using rice 3K database

YL Lin, DH Wu, CC Wu, YF Huang - Botanical studies, 2021 - Springer
Background Weedy rice, a conspecific weedy counterpart of the cultivated rice (Oryza sativa
L.), has been problematic in rice-production area worldwide. Although we started to know …