NKG2A and HLA-E define an alternative immune checkpoint axis in bladder cancer

B Salomé, JP Sfakianos, D Ranti, J Daza, C Bieber… - Cancer Cell, 2022 - cell.com
Programmed cell death protein 1 (PD-1)/programmed death-ligand 1 (PD-L1)-blockade
immunotherapies have limited efficacy in the treatment of bladder cancer. Here, we show …

Multiparametric senescent cell phenotyping reveals targets of senolytic therapy in the aged murine skeleton

ML Doolittle, D Saul, J Kaur, JL Rowsey, SJ Vos… - Nature …, 2023 - nature.com
Senescence drives organismal aging, yet the deep characterization of senescent cells in
vivo remains incomplete. Here, we apply mass cytometry by time-of-flight using carefully …

Computational methods for single-cell proteomics

SM Guldberg, TLH Okholm… - Annual review of …, 2023 - annualreviews.org
Advances in single-cell proteomics technologies have resulted in high-dimensional datasets
comprising millions of cells that are capable of answering key questions about biology and …

Stem cell architecture drives myelodysplastic syndrome progression and predicts response to venetoclax-based therapy

I Ganan-Gomez, H Yang, F Ma, G Montalban-Bravo… - Nature medicine, 2022 - nature.com
Myelodysplastic syndromes (MDS) are heterogeneous neoplastic disorders of
hematopoietic stem cells (HSCs). The current standard of care for patients with MDS is …

ANPELA: Significantly Enhanced Quantification Tool for Cytometry‐Based Single‐Cell Proteomics

Y Zhang, H Sun, X Lian, J Tang, F Zhu - Advanced science, 2023 - Wiley Online Library
ANPELA is widely used for quantifying traditional bulk proteomic data. Recently, there is a
clear shift from bulk proteomics to the single‐cell ones (SCP), for which powerful cytometry …

Spatially resolved immune exhaustion within the alloreactive microenvironment predicts liver transplant rejection

A Barbetta, B Rocque, S Bangerth, K Street… - Science …, 2024 - science.org
Allograft rejection is common following clinical organ transplantation, but defining specific
immune subsets mediating alloimmunity has been elusive. Calcineurin inhibitor dose …

Unveiling the power of high-dimensional cytometry data with cyCONDOR

C Kröger, S Müller, J Leidner, T Kröber… - Nature …, 2024 - nature.com
High-dimensional cytometry (HDC) is a powerful technology for studying single-cell
phenotypes in complex biological systems. Although technological developments and …

Trajectory of spike-specific B cells elicited by two doses of BNT162b2 mRNA vaccine

A Ciabattini, G Pastore, S Lucchesi, G Montesi… - Cells, 2023 - mdpi.com
The mRNA vaccines for SARS-CoV-2 have demonstrated efficacy and immunogenicity in
the real-world setting. However, most of the research on vaccine immunogenicity has been …

[HTML][HTML] Mesothelial cells with mesenchymal features enhance peritoneal dissemination by forming a protumorigenic microenvironment

A Yonemura, T Semba, J Zhang, Y Fan… - Cell Reports, 2024 - cell.com
Malignant ascites accompanied by peritoneal dissemination contain various factors and cell
populations as well as cancer cells; however, how the tumor microenvironment is shaped in …

Th2 single-cell heterogeneity and clonal distribution at distant sites in helminth-infected mice

D Radtke, N Thuma, C Schülein, P Kirchner, AB Ekici… - Elife, 2022 - elifesciences.org
Th2 cells provide effector functions in type 2 immune responses to helminths and allergens.
Despite knowledge about molecular mechanisms of Th2 cell differentiation, there is little …