A systematic survey on deep generative models for graph generation

X Guo, L Zhao - IEEE Transactions on Pattern Analysis and …, 2022 - ieeexplore.ieee.org
Graphs are important data representations for describing objects and their relationships,
which appear in a wide diversity of real-world scenarios. As one of a critical problem in this …

Graphgt: Machine learning datasets for graph generation and transformation

Y Du, S Wang, X Guo, H Cao, S Hu, J Jiang… - Thirty-fifth Conference …, 2021 - openreview.net
Graph generation has shown great potential in applications like network design and mobility
synthesis and is one of the fastest-growing domains in machine learning for graphs. Despite …

Tracking network dynamics: A survey using graph distances

C Donnat, S Holmes - The Annals of Applied Statistics, 2018 - JSTOR
From longitudinal biomedical studies to social networks, graphs have emerged as essential
objects for describing evolving interactions between agents in complex systems. In such …

Network comparison and the within-ensemble graph distance

H Hartle, B Klein, S McCabe… - … of the Royal …, 2020 - royalsocietypublishing.org
Quantifying the differences between networks is a challenging and ever-present problem in
network science. In recent years, a multitude of diverse, ad hoc solutions to this problem …

Cell-connectivity-guided trajectory inference from single-cell data

J Smolander, S Junttila, LL Elo - Bioinformatics, 2023 - academic.oup.com
Motivation Single-cell RNA-sequencing enables cell-level investigation of cell differentiation,
which can be modelled using trajectory inference methods. While tremendous effort has …

A metaproteomic-based gut microbiota profiling in children affected by autism spectrum disorders

SL Mortera, P Vernocchi, I Basadonne, A Zandonà… - Journal of …, 2022 - Elsevier
During the last decade, the evidences on the relationship between neurodevelopmental
disorders and the microbial communities of the intestinal tract have considerably grown …

Discovering technological opportunities by identifying dynamic structure-coupling patterns and lead-lag distance between science and technology

Z Ba, K Meng, Y Ma, Y Xia - Technological Forecasting and Social Change, 2024 - Elsevier
Technological opportunities are bred in intricate and interactive connections between
science and technology (S&T). To identify these potential opportunities, lexical-or topic …

netrd: A library for network reconstruction and graph distances

S McCabe, L Torres, T LaRock, SA Haque… - arXiv preprint arXiv …, 2020 - arxiv.org
Over the last two decades, alongside the increased availability of large network datasets, we
have witnessed the rapid rise of network science. For many systems, however, the data we …

Graph classification based on graph set reconstruction and graph kernel feature reduction

T Ma, W Shao, Y Hao, J Cao - Neurocomputing, 2018 - Elsevier
Graph, a kind of structured data, is widely used to model complex relationships among
objects, and has been used in various of scientific and engineering fields, such as …

Tracking network dynamics: A survey of distances and similarity metrics

C Donnat, S Holmes - arXiv preprint arXiv:1801.07351, 2018 - arxiv.org
From longitudinal biomedical studies to social networks, graphs have emerged as a
powerful framework for describing evolving interactions between agents in complex …