Ion mobility mass spectrometry (IM-MS) for structural biology: insights gained by measuring mass, charge, and collision cross section
E Christofi, P Barran - Chemical Reviews, 2023 - ACS Publications
The investigation of macromolecular biomolecules with ion mobility mass spectrometry (IM-
MS) techniques has provided substantial insights into the field of structural biology over the …
MS) techniques has provided substantial insights into the field of structural biology over the …
Nuclear compartmentalization as a mechanism of quantitative control of gene expression
Gene regulation requires the dynamic coordination of hundreds of regulatory factors at
precise genomic and RNA targets. Although many regulatory factors have specific affinity for …
precise genomic and RNA targets. Although many regulatory factors have specific affinity for …
Protein structure modeling with MODELLER
B Webb, A Sali - Functional genomics: Methods and protocols, 2017 - Springer
Genome sequencing projects have resulted in a rapid increase in the number of known
protein sequences. In contrast, only about one-hundredth of these sequences have been …
protein sequences. In contrast, only about one-hundredth of these sequences have been …
Visualizing the molecular sociology at the HeLa cell nuclear periphery
The molecular organization of eukaryotic nuclear volumes remains largely unexplored. Here
we combined recent developments in cryo–electron tomography (cryo-ET) to produce three …
we combined recent developments in cryo–electron tomography (cryo-ET) to produce three …
NMR spectroscopy captures the essential role of dynamics in regulating biomolecular function
TR Alderson, LE Kay - Cell, 2021 - cell.com
Biomolecules are in constant motion. To understand how they function, and why
malfunctions can cause disease, it is necessary to describe their three-dimensional …
malfunctions can cause disease, it is necessary to describe their three-dimensional …
PeSTo: parameter-free geometric deep learning for accurate prediction of protein binding interfaces
LF Krapp, LA Abriata, F Cortés Rodriguez… - Nature …, 2023 - nature.com
Proteins are essential molecular building blocks of life, responsible for most biological
functions as a result of their specific molecular interactions. However, predicting their …
functions as a result of their specific molecular interactions. However, predicting their …
[HTML][HTML] Interactome networks and human disease
M Vidal, ME Cusick, AL Barabási - Cell, 2011 - cell.com
Complex biological systems and cellular networks may underlie most genotype to
phenotype relationships. Here, we review basic concepts in network biology, discussing …
phenotype relationships. Here, we review basic concepts in network biology, discussing …
Cryo-EM: a unique tool for the visualization of macromolecular complexity
E Nogales, SHW Scheres - Molecular cell, 2015 - cell.com
3D cryo-electron microscopy (cryo-EM) is an expanding structural biology technique that has
recently undergone a quantum leap progression in its achievable resolution and its …
recently undergone a quantum leap progression in its achievable resolution and its …
Quantifying the heterogeneity of macromolecular machines by mass photometry
A Sonn-Segev, K Belacic, T Bodrug, G Young… - Nature …, 2020 - nature.com
Sample purity is central to in vitro studies of protein function and regulation, and to the
efficiency and success of structural studies using techniques such as x-ray crystallography …
efficiency and success of structural studies using techniques such as x-ray crystallography …
Natural supramolecular protein assemblies
BJGE Pieters, MB Van Eldijk, RJM Nolte… - Chemical Society …, 2016 - pubs.rsc.org
Supramolecular protein assemblies are an emerging area within the chemical sciences,
which combine the topological structures of the field of supramolecular chemistry and the …
which combine the topological structures of the field of supramolecular chemistry and the …