[HTML][HTML] Climate change impacts on plant pathogens, food security and paths forward

BK Singh, M Delgado-Baquerizo, E Egidi… - Nature Reviews …, 2023 - nature.com
Plant disease outbreaks pose significant risks to global food security and environmental
sustainability worldwide, and result in the loss of primary productivity and biodiversity that …

Ecological modelling approaches for predicting emergent properties in microbial communities

NI van den Berg, D Machado, S Santos… - Nature ecology & …, 2022 - nature.com
Recent studies have brought forward the critical role of emergent properties in shaping
microbial communities and the ecosystems of which they are a part. Emergent properties …

Microbial sulfur metabolism and environmental implications

B Wu, F Liu, W Fang, T Yang, GH Chen, Z He… - Science of The Total …, 2021 - Elsevier
Sulfur as a macroelement plays an important role in biochemistry in both natural
environments and engineering biosystems, which can be further linked to other important …

[图书][B] Stochastic modelling for systems biology

DJ Wilkinson - 2018 - taylorfrancis.com
Since the first edition of Stochastic Modelling for Systems Biology, there have been many
interesting developments in the use of" likelihood-free" methods of Bayesian inference for …

From microbiome composition to functional engineering, one step at a time

SD Burz, S Causevic, A Dal Co… - Microbiology and …, 2023 - Am Soc Microbiol
Communities of microorganisms (microbiota) are present in all habitats on Earth and are
relevant for agriculture, health, and climate. Deciphering the mechanisms that determine …

[HTML][HTML] Advancements in bacteria based self-healing concrete and the promise of modelling

M Bagga, C Hamley-Bennett, A Alex… - … and Building Materials, 2022 - Elsevier
In the last two decades self-healing of concrete through microbial based carbonate
precipitation has emerged as a promising technology for making concrete structures more …

[HTML][HTML] Spatiotemporal establishment of dense bacterial colonies growing on hard agar

MR Warren, H Sun, Y Yan, J Cremer, B Li, T Hwa - Elife, 2019 - elifesciences.org
The physical interactions of growing bacterial cells with each other and with their
surroundings significantly affect the structure and dynamics of biofilms. Here a 3D agent …

Agent-based modeling of microbial communities

K Nagarajan, C Ni, T Lu - ACS synthetic biology, 2022 - ACS Publications
Microbial communities are complex living systems that populate the planet with diverse
functions and are increasingly harnessed for practical human needs. To deepen the …

[HTML][HTML] Translational challenges and opportunities in biofilm science: a BRIEF for the future

CJ Highmore, G Melaugh, RJ Morris, J Parker… - npj Biofilms and …, 2022 - nature.com
Biofilms are increasingly recognised as a critical global issue in a multitude of industries
impacting health, food and water security, marine sector, and industrial processes resulting …

Towards a deeper understanding of microbial communities: integrating experimental data with dynamic models

Y Qian, F Lan, OS Venturelli - Current opinion in microbiology, 2021 - Elsevier
Highlights•Dynamic models are powerful tools to understand and engineer microbial
communities.•Model frameworks vary across scales and require different types of …