Protein design: From the aspect of water solubility and stability
Water solubility and structural stability are key merits for proteins defined by the primary
sequence and 3D-conformation. Their manipulation represents important aspects of the …
sequence and 3D-conformation. Their manipulation represents important aspects of the …
Structure and aggregation mechanisms in amyloids
ZL Almeida, RMM Brito - Molecules, 2020 - mdpi.com
The aggregation of a polypeptide chain into amyloid fibrils and their accumulation and
deposition into insoluble plaques and intracellular inclusions is the hallmark of several …
deposition into insoluble plaques and intracellular inclusions is the hallmark of several …
PASTA 2.0: an improved server for protein aggregation prediction
The formation of amyloid aggregates upon protein misfolding is related to several
devastating degenerative diseases. The propensities of different protein sequences to …
devastating degenerative diseases. The propensities of different protein sequences to …
[HTML][HTML] Computational methods to predict protein aggregation
In most cases, protein aggregation stems from the establishment of non-native
intermolecular contacts. The formation of insoluble protein aggregates is associated with …
intermolecular contacts. The formation of insoluble protein aggregates is associated with …
Computational methods and tools in antimicrobial peptide research
PGA Aronica, LM Reid, N Desai, J Li… - Journal of Chemical …, 2021 - ACS Publications
The evolution of antibiotic-resistant bacteria is an ongoing and troubling development that
has increased the number of diseases and infections that risk going untreated. There is an …
has increased the number of diseases and infections that risk going untreated. There is an …
A consensus method for the prediction of 'aggregation-prone'peptides in globular proteins
AC Tsolis, NC Papandreou, VA Iconomidou… - PloS one, 2013 - journals.plos.org
The purpose of this work was to construct a consensus prediction algorithm of 'aggregation-
prone'peptides in globular proteins, combining existing tools. This allows comparison of the …
prone'peptides in globular proteins, combining existing tools. This allows comparison of the …
Physical basis of amyloid fibril polymorphism
Polymorphism is a key feature of amyloid fibril structures but it remains challenging to
explain these variations for a particular sample. Here, we report electron cryomicroscopy …
explain these variations for a particular sample. Here, we report electron cryomicroscopy …
Pathologic polyglutamine aggregation begins with a self-poisoning polymer crystal
T Kandola, S Venkatesan, J Zhang, BT Lerbakken… - Elife, 2023 - elifesciences.org
A long-standing goal of amyloid research has been to characterize the structural basis of the
rate-determining nucleating event. However, the ephemeral nature of nucleation has made …
rate-determining nucleating event. However, the ephemeral nature of nucleation has made …
Accumulation of storage proteins in plant seeds is mediated by amyloid formation
KS Antonets, MV Belousov, AI Sulatskaya… - PLoS …, 2020 - journals.plos.org
Amyloids are protein aggregates with a highly ordered spatial structure giving them unique
physicochemical properties. Different amyloids not only participate in the development of …
physicochemical properties. Different amyloids not only participate in the development of …
MetAmyl: a METa-predictor for AMYLoid proteins
M Emily, A Talvas, C Delamarche - PloS one, 2013 - journals.plos.org
The aggregation of proteins or peptides in amyloid fibrils is associated with a number of
clinical disorders, including Alzheimer's, Huntington's and prion diseases, medullary thyroid …
clinical disorders, including Alzheimer's, Huntington's and prion diseases, medullary thyroid …