Extinction and morphospace occupation: A critical review

PD Polly - Cambridge Prisms: Extinction, 2023 - cambridge.org
Processes of extinction, especially selectivity, can be studied using the distribution of
species in morphospace. Random extinction reduces the number of species but has little …

Endless forams:> 34,000 modern planktonic foraminiferal images for taxonomic training and automated species recognition using convolutional neural networks

AY Hsiang, A Brombacher, MC Rillo… - Paleoceanography …, 2019 - Wiley Online Library
Planktonic foraminiferal species identification is central to many paleoceanographic studies,
from selecting species for geochemical research to elucidating the biotic dynamics of …

Species-level microfossil identification for globotruncana genus using hybrid deep learning algorithms from the scratch via a low-cost light microscope imaging

I Ozer, CK Ozer, AC Karaca, K Gorur, I Kocak… - Multimedia Tools and …, 2023 - Springer
Paleontologists generally use a low-cost electro-optical system to classify microfossils. This
manual identification is a time-consuming process and it may take about a long time …

Time machine biology

M Yasuhara, HHM Huang, P Hull, MC Rillo… - Oceanography, 2020 - JSTOR
Direct observations of marine ecosystems are inherently limited in their temporal scope. Yet,
ongoing global anthropogenic change urgently requires improved understanding of long …

Species-Level Microfossil Prediction for Globotruncana genus Using Machine Learning Models

K Gorur, C Kaya Ozer, I Ozer, A Can Karaca… - Arabian Journal for …, 2023 - Springer
Microfossils provide evidence and knowledge about the Earth, life, ecology, and biological
changes, and one way to access this knowledge is through the classification of microfossil …

Forabot: Automated planktic foraminifera isolation and imaging

T Richmond, J Cole, G Dangler… - Geochemistry …, 2022 - Wiley Online Library
Physical inspection and sorting of foraminifera is a necessity in many research labs, as
foraminifera serve as paleoenvironmental and chronostratigraphic indicators. In order to …

An 800-year record of benthic foraminifer images and 2D morphometrics from the Santa Barbara Basin

SS Kahanamoku-Meyer, M Samuels-Fair, SM Kamel… - Scientific Data, 2024 - nature.com
Abstract The Santa Barbara Basin is an extraordinary archive of environmental and
ecological change, where varved sediments preserve microfossils that provide an annual to …

ForametCeTera, a novel CT scan dataset to expedite classification research of (non-) foraminifera

J Luijmes, T van Leeuwen, W Renema - Scientific Data, 2024 - nature.com
This paper introduces ForametCeTera, a pioneering dataset designed to address the
challenges associated with automating the analysis of benthic foraminifera in sediment …

Visual microfossil identification via deep metric learning

T Karaderi, T Burghardt, AY Hsiang, J Ramaer… - … Conference on Pattern …, 2022 - Springer
We apply deep metric learning for the first time to the problem of classifying planktic
foraminifer shells on microscopic images. This species recognition task is an important …

The exploration of the transfer learning technique for Globotruncanita genus against the limited low-cost light microscope images

I Ozer, AC Karaca, CK Ozer, K Gorur, I Kocak… - Signal, Image and Video …, 2024 - Springer
Microfossils are single-celled micro-organisms and are noted as a powerful analysis way in
earth sciences for determining geological age and in paleoenvironmental studies. However …