From haematopoietic stem cells to complex differentiation landscapes
E Laurenti, B Göttgens - Nature, 2018 - nature.com
The development of mature blood cells from haematopoietic stem cells has long served as a
model for stem-cell research, with the haematopoietic differentiation tree being widely used …
model for stem-cell research, with the haematopoietic differentiation tree being widely used …
Causes and consequences of hematopoietic stem cell heterogeneity
Blood and immune cells derive from multipotent hematopoietic stem cells (HSCs).
Classically, stem and progenitor populations have been considered discrete homogeneous …
Classically, stem and progenitor populations have been considered discrete homogeneous …
The single-cell epigenomic and transcriptional landscape of immunity to influenza vaccination
Emerging evidence indicates a fundamental role for the epigenome in immunity. Here, we
mapped the epigenomic and transcriptional landscape of immunity to influenza vaccination …
mapped the epigenomic and transcriptional landscape of immunity to influenza vaccination …
[HTML][HTML] Circulating tumor cell clustering shapes DNA methylation to enable metastasis seeding
S Gkountela, F Castro-Giner, BM Szczerba, M Vetter… - Cell, 2019 - cell.com
The ability of circulating tumor cells (CTCs) to form clusters has been linked to increased
metastatic potential. Yet biological features and vulnerabilities of CTC clusters remain …
metastatic potential. Yet biological features and vulnerabilities of CTC clusters remain …
Integrated single-cell analysis maps the continuous regulatory landscape of human hematopoietic differentiation
Human hematopoiesis involves cellular differentiation of multipotent cells into progressively
more lineage-restricted states. While the chromatin accessibility landscape of this process …
more lineage-restricted states. While the chromatin accessibility landscape of this process …
Single-cell multimodal glioma analyses identify epigenetic regulators of cellular plasticity and environmental stress response
KC Johnson, KJ Anderson, ET Courtois, AD Gujar… - Nature …, 2021 - nature.com
Glioma intratumoral heterogeneity enables adaptation to challenging microenvironments
and contributes to therapeutic resistance. We integrated 914 single-cell DNA methylomes …
and contributes to therapeutic resistance. We integrated 914 single-cell DNA methylomes …
Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling
DNA methylation microarrays can be employed to interrogate cell-type composition in
complex tissues. Here, we expand reference-based deconvolution of blood DNA …
complex tissues. Here, we expand reference-based deconvolution of blood DNA …
[HTML][HTML] The International Human Epigenome Consortium: a blueprint for scientific collaboration and discovery
HG Stunnenberg, S Abrignani, D Adams, M de Almeida… - Cell, 2016 - cell.com
The International Human Epigenome Consortium (IHEC) coordinates the generation of a
catalog of high-resolution reference epigenomes of major primary human cell types. The …
catalog of high-resolution reference epigenomes of major primary human cell types. The …
DNA methylation loss in late-replicating domains is linked to mitotic cell division
DNA methylation loss occurs frequently in cancer genomes, primarily within lamina-
associated, late-replicating regions termed partially methylated domains (PMDs). We …
associated, late-replicating regions termed partially methylated domains (PMDs). We …
A pan-tissue DNA methylation atlas enables in silico decomposition of human tissue methylomes at cell-type resolution
Bulk-tissue DNA methylomes represent an average over many different cell types,
hampering our understanding of cell-type-specific contributions to disease development. As …
hampering our understanding of cell-type-specific contributions to disease development. As …