Two-photon calcium imaging of neuronal activity

C Grienberger, A Giovannucci, W Zeiger… - Nature Reviews …, 2022 - nature.com
In vivo two-photon calcium imaging (2PCI) is a technique used for recording neuronal
activity in the intact brain. It is based on the principle that, when neurons fire action …

Probing neural codes with two-photon holographic optogenetics

H Adesnik, L Abdeladim - Nature neuroscience, 2021 - nature.com
Optogenetics ushered in a revolution in how neuroscientists interrogate brain function.
Because of technical limitations, the majority of optogenetic studies have used low spatial …

[HTML][HTML] Controlling visually guided behavior by holographic recalling of cortical ensembles

L Carrillo-Reid, S Han, W Yang, A Akrouh, R Yuste - Cell, 2019 - cell.com
Neurons in cortical circuits are often coactivated as ensembles, yet it is unclear whether
ensembles play a functional role in behavior. Some ensemble neurons have pattern …

Fluorescence imaging of large-scale neural ensemble dynamics

TH Kim, MJ Schnitzer - Cell, 2022 - cell.com
Recent progress in fluorescence imaging allows neuroscientists to observe the dynamics of
thousands of individual neurons, identified genetically or by their connectivity, across …

Simultaneous denoising, deconvolution, and demixing of calcium imaging data

EA Pnevmatikakis, D Soudry, Y Gao, TA Machado… - Neuron, 2016 - cell.com
We present a modular approach for analyzing calcium imaging recordings of large neuronal
ensembles. Our goal is to simultaneously identify the locations of the neurons, demix …

DeepCGH: 3D computer-generated holography using deep learning

M Hossein Eybposh, NW Caira, M Atisa… - Optics …, 2020 - opg.optica.org
The goal of computer-generated holography (CGH) is to synthesize custom illumination
patterns by modulating a coherent light beam. CGH algorithms typically rely on iterative …

In vivo imaging of neural activity

W Yang, R Yuste - Nature methods, 2017 - nature.com
Since the introduction of calcium imaging to monitor neuronal activity with single-cell
resolution, optical imaging methods have revolutionized neuroscience by enabling …

Simultaneous all-optical manipulation and recording of neural circuit activity with cellular resolution in vivo

AM Packer, LE Russell, HWP Dalgleish, M Häusser - Nature methods, 2015 - nature.com
We describe an all-optical strategy for simultaneously manipulating and recording the
activity of multiple neurons with cellular resolution in vivo. We performed simultaneous two …

Precise multimodal optical control of neural ensemble activity

AR Mardinly, IA Oldenburg, NC Pégard… - Nature …, 2018 - nature.com
Understanding brain function requires technologies that can control the activity of large
populations of neurons with high fidelity in space and time. We developed a multiphoton …

All-optical interrogation of neural circuits

V Emiliani, AE Cohen, K Deisseroth… - Journal of …, 2015 - Soc Neuroscience
There have been two recent revolutionary advances in neuroscience: First, genetically
encoded activity sensors have brought the goal of optical detection of single action …