Bacterial reference genes for gene expression studies by RT-qPCR: survey and analysis

DJP Rocha, CS Santos, LGC Pacheco - Antonie Van Leeuwenhoek, 2015 - Springer
The appropriate choice of reference genes is essential for accurate normalization of gene
expression data obtained by the method of reverse transcription quantitative real-time PCR …

Identification of novel reference genes suitable for qRT-PCR normalization with respect to the zebrafish developmental stage

Y Hu, S Xie, J Yao - Plos one, 2016 - journals.plos.org
Reference genes used in normalizing qRT-PCR data are critical for the accuracy of gene
expression analysis. However, many traditional reference genes used in zebrafish early …

In vivo and in vitro expression of five genes involved in Corynebacterium pseudotuberculosis virulence

JI Corrêa, A Stocker, SC Trindade, V Vale, T Brito… - AMB Express, 2018 - Springer
Caseous lymphadenitis (LC) is a chronic contagious disease caused by Corynebacterium
pseudotuberculosis, which mainly affects goats and sheep. Vaccination is an effective but …

Gene expression analysis in bacteria by RT-qPCR

DJPG Rocha, TLP Castro, ERGR Aguiar… - Quantitative Real-Time …, 2020 - Springer
Reverse-transcription quantitative real-time polymerase chain reaction (RT-qPCR) using
fluorescent DNA-binding dyes is now a gold-standard methodology to study bacterial gene …

Non-Caloric Artificial Sweeteners Modulate the Expression of Key Metabolic Genes in the Omnipresent Gut Microbe Escherichia coli

R Mahmud, S Shehreen, S Shahriar… - Journal of Molecular …, 2020 - karger.com
The human gut is inhabited by several hundred different bacterial species. These bacteria
are closely associated with our health and well-being. The composition of these diverse …

Reference Genes for Expression Analyses by qRT-PCR in Enterobacter cancerogenus

Y Pan, Y Zhao, HR Zeng, JQ Wu, YY Song, YH Rao… - Microorganisms, 2024 - mdpi.com
The Enterobacter cancerogenus strain EcHa1 was isolated from the dead larvae of
Helicoverpa armigera, and has the potential for biocontrol of some Lepidoptera insects. In …

Selection and validation of novel stable reference genes for qPCR analysis in EMT and MET

S Yetkin, H Alotaibi - Experimental Cell Research, 2023 - Elsevier
Quantitative real-time polymerase chain reaction is a powerful tool for quantifying gene
expression. The relative quantification relies on normalizing the data to reference genes or …

Screening the Reference Genes for Quantitative Gene Expression by RT-qPCR During SE Initial Dedifferentiation in Four Gossypium hirsutum Cultivars that Have …

A Cao, D Shao, B Cui, X Tong, Y Zheng, J Sun, H Li - Genes, 2019 - mdpi.com
RNA sequencing (RNA-Seq)-based gene expression analysis is applicable to a wide range
of biological purposes in various species. Reverse transcription quantitative PCR (RT …

The genome anatomy of Corynebacterium pseudotuberculosis VD57 a highly virulent strain causing Caseous lymphadenitis

S Almeida, S Tiwari, D Mariano, F Souza… - Standards in Genomic …, 2016 - Springer
Corynebacterium pseudotuberculosis strain VD57 (Cp_VD57), a highly virulent, nonmotile,
non-sporulating, and a mesophilic bacterium, was isolated from a goat's granulomatous …

Evaluation of suitable reference genes for normalization of quantitative reverse transcription PCR analyses in Clavibacter michiganensis

N Jiang, Q Lyu, S Han, X Xu, RR Walcott, J Li… - …, 2019 - Wiley Online Library
Clavibacter michiganensis, the causal agent of bacterial canker of tomato, is a Gram‐
positive bacterium and a model for studying plant diseases. The real‐time quantitative …