[HTML][HTML] Aquatic environmental DNA: A review of the macro-organismal biomonitoring revolution

M Takahashi, M Saccò, JH Kestel, G Nester… - Science of the Total …, 2023 - Elsevier
Environmental DNA (eDNA) is the fastest growing biomonitoring tool fuelled by two key
features: time efficiency and sensitivity. Technological advancements allow rapid …

Environmental DNA metabarcoding: A novel method for biodiversity monitoring of marine fish communities

M Miya - Annual Review of Marine Science, 2022 - annualreviews.org
Environmental DNA (eDNA) is genetic material that has been shed from macroorganisms. It
has received increased attention as an indirect marker for biodiversity monitoring. This …

[HTML][HTML] MiFish metabarcoding: a high-throughput approach for simultaneous detection of multiple fish species from environmental DNA and other samples

M Miya, RO Gotoh, T Sado - Fisheries Science, 2020 - Springer
We reviewed the current methodology and practices of the DNA metabarcoding approach
using a universal PCR primer pair MiFish, which co-amplifies a short fragment of fish DNA …

The detection of aquatic macroorganisms using environmental DNA analysis—A review of methods for collection, extraction, and detection

S Tsuji, T Takahara, H Doi, N Shibata… - Environmental …, 2019 - Wiley Online Library
The field of environmental DNA (eDNA) analysis has rapidly developed over the past
decade and the technique has become widely used for detecting aquatic macroorganisms in …

[HTML][HTML] eDNA metabarcoding as a biomonitoring tool for marine protected areas

Z Gold, J Sprague, DJ Kushner, E Zerecero Marin… - PLoS …, 2021 - journals.plos.org
Monitoring of marine protected areas (MPAs) is critical for marine ecosystem management,
yet current protocols rely on SCUBA-based visual surveys that are costly and time …

Environmental DNA enables detection of terrestrial mammals from forest pond water

M Ushio, H Fukuda, T Inoue, K Makoto… - Molecular Ecology …, 2017 - Wiley Online Library
Terrestrial animals must have frequent contact with water to survive, implying that
environmental DNA (eDNA) originating from those animals should be detectable from …

One size does not fit all: Tuning eDNA protocols for high‐and low‐turbidity water sampling

G Kumar, E Farrell, AM Reaume, JA Eble… - Environmental …, 2022 - Wiley Online Library
Findings from eDNA metabarcoding are strongly influenced by experimental approach, yet
the effect of pre‐PCR sample processing on taxon detection and estimates of biodiversity …

[HTML][HTML] Comparing eDNA metabarcoding primers for assessing fish communities in a biodiverse estuary

G Kumar, AM Reaume, E Farrell, MR Gaither - PloS one, 2022 - journals.plos.org
Metabarcoding of environmental DNA is increasingly used for biodiversity assessments in
aquatic communities. The efficiency and outcome of these efforts are dependent upon either …

[HTML][HTML] Fish environmental RNA enables precise ecological surveys with high positive predictivity

K Miyata, Y Inoue, Y Amano, T Nishioka, M Yamane… - Ecological …, 2021 - Elsevier
Metabarcoding analysis using environmental DNA (eDNA) is increasingly being used for
monitoring biota. However, knowledge regarding abundance of fish environmental RNA …

The effect of filtration method on the efficiency of environmental DNA capture and quantification via metabarcoding

J Li, LJ Lawson Handley, DS Read… - Molecular Ecology …, 2018 - Wiley Online Library
Environmental DNA (eDNA) is a promising tool for rapid and noninvasive biodiversity
monitoring. eDNA density is low in environmental samples, and a capture method, such as …