The availability of public genomic resources can greatly assist biodiversity assessment,
conservation, and restoration efforts by providing evidence for scientifically informed …

Progress in genome sequencing now enables the large-scale generation of reference
genomes. Various international initiatives aim to generate reference genomes representing …

Pangenome graphs can represent all variation between multiple reference genomes, but
current approaches to build them exclude complex sequences or are based upon a single …

The recent advances in sequencing technologies enable the assembly of individual
genomes to the quality of the reference genome. How to integrate multiple genomes from …

Due to the development of sequencing technology and the great reduction in sequencing
costs, an increasing number of plant genomes have been assembled, and numerous …

Most human genomes are characterized by aligning individual reads to the reference
genome, but accurate long reads and linked reads now enable us to construct accurate …

With increase in the number of sequenced genomes, it is now recognized that graph-based
pangenomes can provide a comprehensive platform to study diversity in a population or …

Motivation Pangenomes provide novel insights for population and quantitative genetics,
genomics and breeding not available from studying a single reference genome. Instead, a …

Whole‐genome sequencing of non‐model organisms is now widely accessible and has
allowed a range of questions in the field of molecular ecology to be investigated with greater …

Graph-based genome representations have proven to be a powerful tool in genomic
analysis due to their ability to encode variations found in multiple haplotypes and capture …