ER body‐resident myrosinases and tryptophan specialized metabolism modulate root microbiota assembly

AK Basak, A Piasecka, J Hucklenbroich… - New …, 2024 - Wiley Online Library
Endoplasmic reticulum (ER) bodies are ER‐derived structures that contain a large amount of
PYK10 myrosinase, which hydrolyzes tryptophan (Trp)‐derived indole glucosinolates (IGs) …

Chromosomal barcodes for simultaneous tracking of near-isogenic bacterial strains in plant microbiota

J Ordon, J Thouin, RT Nakano, KW Ma, P Zhang… - Nature …, 2024 - nature.com
DNA-amplicon-based microbiota profiling can estimate species diversity and abundance but
cannot resolve genetic differences within individuals of the same species. Here we report …

From lab bench to farmers' fields: Co-creating microbial inoculants with farmers input

A Adeniji, AE Fadiji, S Li, R Guo - Rhizosphere, 2024 - Elsevier
Microbial inoculants are critical tools for improving soil health and crop growth within
sustainable agriculture frameworks. Despite numerous microorganisms being identified as …

[HTML][HTML] Arsenic-triggered bacterial minorities correlate with arsenic accumulation in cabbage

H Li, H Zhang, WX Huang, ZS Yu, M Pan, HM Zhao… - Geoderma, 2023 - Elsevier
Arsenic (As) in vegetables imposes severe health risks. Selecting low As cultivars is a
practical means to mitigate the risk; however, little is known about whether low-accumulating …

Simultaneous tracking of near-isogenic bacterial strains in synthetic Arabidopsis microbiota by chromosomally-integrated barcodes

J Ordon, J Thouin, RT Nakano, KW Ma, P Zhang… - bioRxiv, 2023 - biorxiv.org
DNA amplicon-based microbiota profiling currently relies on polymorphisms in microbial
marker genes to estimate species diversity and abundance. However, this technique cannot …

Tryptophan specialized metabolism and ER body-resident myrosinases modulate root microbiota assembly

AK Basak, A Piasecka, J Hucklenbroich, GM Türksoy… - BioRxiv, 2022 - biorxiv.org
Indole glucosinolates (IGs) are tryptophan (Trp)-derived sulfur-containing specialized
metabolites that play a crucial role in plant-microbe interactions in plants of the order …

Modulation of Arabidopsis growth by volatile organic compounds from a root-derived bacterial community

GM Türksoy, R Carron, A Koprivova, S Kopriva… - bioRxiv, 2022 - biorxiv.org
Plant roots are surrounded by fluctuating biotic and abiotic factors. The living component–
the microbiota–is actively shaped by the plant and plays an important role in overall plant …

[PDF][PDF] Plant-associated microbial community diversity and network feature analysis

R Guan - 2023 - docserv.uni-duesseldorf.de
Microbes are present in most of the environments on earth. By interacting with each other,
macroorganisms, and the surrounding habitat, they form diverse microbial communities …

ER bodies and their impact in shaping root microbiota

A Basak - 2022 - ruj.uj.edu.pl
Plants in nature are exposed to stress from a plethora of microbes in the soil that compete for
the organic carbon produced by the plants. Some microbes are beneficial to plants, and …

La interacción de Micromonospora con su planta huésped y el microbioma circundante

M Ortúzar Turza - 2023 - gredos.usal.es
El suelo presenta uno de los ecosistemas más diversos de nuestro planeta y cuando se
combina con la influencia de las plantas y la fauna, así como con los cambios en la …