Inhibitory stabilization and cortical computation

S Sadeh, C Clopath - Nature Reviews Neuroscience, 2021 - nature.com
Neuronal networks with strong recurrent connectivity provide the brain with a powerful
means to perform complex computational tasks. However, high-gain excitatory networks are …

BioModels—15 years of sharing computational models in life science

RS Malik-Sheriff, M Glont, TVN Nguyen… - Nucleic acids …, 2020 - academic.oup.com
Computational modelling has become increasingly common in life science research. To
provide a platform to support universal sharing, easy accessibility and model reproducibility …

Connectivity concepts in neuronal network modeling

J Senk, B Kriener, M Djurfeldt, N Voges… - PLoS computational …, 2022 - journals.plos.org
Sustainable research on computational models of neuronal networks requires published
models to be understandable, reproducible, and extendable. Missing details or ambiguities …

The Neurodata Without Borders ecosystem for neurophysiological data science

O Rübel, A Tritt, R Ly, BK Dichter, S Ghosh, L Niu… - Elife, 2022 - elifesciences.org
The neurophysiology of cells and tissues are monitored electrophysiologically and optically
in diverse experiments and species, ranging from flies to humans. Understanding the brain …

NetPyNE, a tool for data-driven multiscale modeling of brain circuits

S Dura-Bernal, BA Suter, P Gleeson, M Cantarelli… - Elife, 2019 - elifesciences.org
Biophysical modeling of neuronal networks helps to integrate and interpret rapidly growing
and disparate experimental datasets at multiple scales. The NetPyNE tool (www. netpyne …

Modernizing the NEURON simulator for sustainability, portability, and performance

O Awile, P Kumbhar, N Cornu… - Frontiers in …, 2022 - frontiersin.org
The need for reproducible, credible, multiscale biological modeling has led to the
development of standardized simulation platforms, such as the widely-used NEURON …

Methods and considerations for estimating parameters in biophysically detailed neural models with simulation based inference

N Tolley, PLC Rodrigues, A Gramfort… - PLOS Computational …, 2024 - journals.plos.org
Biophysically detailed neural models are a powerful technique to study neural dynamics in
health and disease with a growing number of established and openly available models. A …

Brain Modeling ToolKit: An open source software suite for multiscale modeling of brain circuits

K Dai, SL Gratiy, YN Billeh, R Xu, B Cai… - PLOS Computational …, 2020 - journals.plos.org
Experimental studies in neuroscience are producing data at a rapidly increasing rate,
providing exciting opportunities and formidable challenges to existing theoretical and …

Data-driven multiscale model of macaque auditory thalamocortical circuits reproduces in vivo dynamics

S Dura-Bernal, EY Griffith, A Barczak, MN O'Connell… - Cell reports, 2023 - cell.com
We developed a detailed model of macaque auditory thalamocortical circuits, including
primary auditory cortex (A1), medial geniculate body (MGB), and thalamic reticular nucleus …

[图书][B] Neuromorphic Engineering: The Scientist's, Algorithms Designer's and Computer Architect's Perspectives on Brain-Inspired Computing

EE Tsur - 2021 - taylorfrancis.com
The brain is not a glorified digital computer. It does not store information in registers, and it
does not mathematically transform mental representations to establish perception or …