Gene regulatory network inference resources: A practical overview
D Mercatelli, L Scalambra, L Triboli, F Ray… - Biochimica et Biophysica …, 2020 - Elsevier
Transcriptional regulation is a fundamental molecular mechanism involved in almost every
aspect of life, from homeostasis to development, from metabolism to behavior, from reaction …
aspect of life, from homeostasis to development, from metabolism to behavior, from reaction …
[HTML][HTML] Microfluidics facilitates the development of single-cell RNA sequencing
Y Pan, W Cao, Y Mu, Q Zhu - Biosensors, 2022 - mdpi.com
Single-cell RNA sequencing (scRNA-seq) technology provides a powerful tool for
understanding complex biosystems at the single-cell and single-molecule level. The past …
understanding complex biosystems at the single-cell and single-molecule level. The past …
Analysis of molecular mechanism of erxian decoction in treating osteoporosis based on formula optimization model
L Yang, L Fan, K Wang, Y Chen, L Liang… - Oxidative medicine …, 2021 - Wiley Online Library
Osteoporosis (OP) is a highly prevalent orthopedic condition in postmenopausal women and
the elderly. Currently, OP treatments mainly include bisphosphonates, receptor activator of …
the elderly. Currently, OP treatments mainly include bisphosphonates, receptor activator of …
[HTML][HTML] Integrated modeling framework reveals co-regulation of transcription factors, miRNAs and lncRNAs on cardiac developmental dynamics
Aims Dissecting complex interactions among transcription factors (TFs), microRNAs
(miRNAs) and long noncoding RNAs (lncRNAs) are central for understanding heart …
(miRNAs) and long noncoding RNAs (lncRNAs) are central for understanding heart …
Integrated transcriptomic and regulatory network analyses identify microRNA-200c as a novel repressor of human pluripotent stem cell-derived cardiomyocyte …
Aims MicroRNAs (miRNAs) are crucial for the post-transcriptional control of protein-
encoding genes and together with transcription factors (TFs) regulate gene expression; …
encoding genes and together with transcription factors (TFs) regulate gene expression; …
[HTML][HTML] A novel network pharmacology strategy to decode mechanism of Lang Chuang Wan in treating systemic lupus erythematosus
Y Gao, K Wang, P Wang, X Li, J Chen, B Zhou… - Frontiers in …, 2020 - frontiersin.org
Complex disease is a cascade process which is associated with functional abnormalities in
multiple proteins and protein-protein interaction (PPI) networks. One drug one target has not …
multiple proteins and protein-protein interaction (PPI) networks. One drug one target has not …
[HTML][HTML] A novel strategy for decoding and validating the combination principles of huanglian jiedu decoction from multi-scale perspective
KX Wang, Y Gao, WX Gong, XF Ye, LY Fan… - Frontiers in …, 2020 - frontiersin.org
Traditional Chinese medicine (TCM) formulas treat complex diseases through combined
botanical drugs which follow specific compatibility rules to reduce toxicity and increase …
botanical drugs which follow specific compatibility rules to reduce toxicity and increase …
[HTML][HTML] BGRMI: A method for inferring gene regulatory networks from time-course gene expression data and its application in breast cancer research
Reconstructing gene regulatory networks (GRNs) from gene expression data is a
challenging problem. Existing GRN reconstruction algorithms can be broadly divided into …
challenging problem. Existing GRN reconstruction algorithms can be broadly divided into …
The current status and challenges in computational analysis of genomic big data
DNA, RNA and protein are three major kinds of biological macromolecules with up to billions
of basic elements in such biological organisms as human or mouse. They function at …
of basic elements in such biological organisms as human or mouse. They function at …
CirGRDB: a database for the genome-wide deciphering circadian genes and regulators
X Li, L Shi, K Zhang, W Wei, Q Liu, F Mao… - Nucleic Acids …, 2018 - academic.oup.com
Circadian rhythms govern various kinds of physiological and behavioral functions of the
living organisms, and disruptions of the rhythms are highly detrimental to health. Although …
living organisms, and disruptions of the rhythms are highly detrimental to health. Although …