Formal language theory and DNA: an analysis of the generative capacity of specific recombinant behaviors

T Head - Bulletin of mathematical biology, 1987 - Springer
A new manner of relating formal language theory to the study of informational
macromolecules is initiated. A language is associated with each pair of sets where the first …

[图书][B] DNA computing: new computing paradigms

G Paun, G Rozenberg, A Salomaa - 2005 - books.google.com
This is the first book on DNA computing, a molecular approach that may revolutionize
computing-replacing silicon with carbon and microchips with DNA molecules. The book …

Syntactic semigroups

JE Pin - Handbook of Formal Languages: Volume 1 Word …, 2013 - Springer
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Language theory and molecular genetics: generative mechanisms suggested by DNA recombination

T Head, G Păun, D Pixton - Handbook of Formal Languages: Volume 2 …, 2013 - Springer
The stimulus for the development of the theory presented in this chapter is the string
behaviors exhibited by the group of molecules often referred to collectively as the …

On the splicing operation

G Păun - Discrete Applied Mathematics, 1996 - Elsevier
We propose here a systematic formal study of the splicing operation introduced by Head as
a model of recombinant behavior of DNA. We consider both simple and iterated splicing …

Splicing schemes and DNA

T Head - Lindenmayer systems: impacts on theoretical computer …, 1992 - Springer
Splicing schemes are formal devices which act on sets of strings in a manner that is
suggested by the action of sets of restriction enzymes and a ligase on double stranded DNA …

Array splicing systems

K Krithivasan, VT Chakaravarthy, R Rama - New Trends in Formal …, 1997 - Springer
In this paper the concept of splicing is extended to arrays and array or 2D splicing systems
are defined. Various subclasses of 2D splicing systems are defined and a restricted class …

Relativized adjacency

D Lambert - Journal of Logic, Language and Information, 2023 - Springer
For each class in the piecewise-local subregular hierarchy, a relativized (tier-based) variant
is defined. Algebraic as well as automata-, language-, and model-theoretic characterizations …

Simple splicing systems

A Mateescu, G Păun, G Rozenberg… - Discrete Applied …, 1998 - Elsevier
We consider one of the most restrictive classes of splicing (H) systems, namely based on
splicing rules of the form (a, λ; a, λ), where a is a symbol in a given set and λ is the empty …

Grammar interpretations and learning TSL online

D Lambert - International Conference on Grammatical …, 2021 - proceedings.mlr.press
The tier-based strictly local ($\TSL {} $) languages are a class of formal languages that,
alongside the strictly piecewise class, effectively model some long-distance generalizations …