[HTML][HTML] Patient similarity for precision medicine: A systematic review

E Parimbelli, S Marini, L Sacchi, R Bellazzi - Journal of biomedical …, 2018 - Elsevier
Evidence-based medicine is the most prevalent paradigm adopted by physicians. Clinical
practice guidelines typically define a set of recommendations together with eligibility criteria …

Learning to optimize: reference vector reinforcement learning adaption to constrained many-objective optimization of industrial copper burdening system

L Ma, N Li, Y Guo, X Wang, S Yang… - IEEE Transactions …, 2021 - ieeexplore.ieee.org
The performance of decomposition-based algorithms is sensitive to the Pareto front shapes
since their reference vectors preset in advance are not always adaptable to various problem …

MOLI: multi-omics late integration with deep neural networks for drug response prediction

H Sharifi-Noghabi, O Zolotareva, CC Collins… - …, 2019 - academic.oup.com
Motivation Historically, gene expression has been shown to be the most informative data for
drug response prediction. Recent evidence suggests that integrating additional omics can …

[HTML][HTML] An unsupervised machine learning method for discovering patient clusters based on genetic signatures

C Lopez, S Tucker, T Salameh, C Tucker - Journal of biomedical informatics, 2018 - Elsevier
Introduction Many chronic disorders have genomic etiology, disease progression, clinical
presentation, and response to treatment that vary on a patient-to-patient basis. Such …

Evolutionary multiobjective clustering and its applications to patient stratification

X Li, KC Wong - IEEE transactions on cybernetics, 2018 - ieeexplore.ieee.org
Patient stratification has a major role in enabling efficient and personalized medicine. An
important task in patient stratification is to discover disease subtypes for effective treatment …

Evolutionary multiobjective clustering algorithms with ensemble for patient stratification

Y Wang, X Li, KC Wong, Y Chang… - IEEE Transactions on …, 2021 - ieeexplore.ieee.org
Patient stratification has been studied widely to tackle subtype diagnosis problems for
effective treatment. Due to the dimensionality curse and poor interpretability of data, there is …

MoSBi: Automated signature mining for molecular stratification and subtyping

TD Rose, T Bechtler, OA Ciora… - Proceedings of the …, 2022 - National Acad Sciences
The improving access to increasing amounts of biomedical data provides completely new
chances for advanced patient stratification and disease subtyping strategies. This requires …

Nature-inspired multiobjective patient stratification from cancer gene expression data

Y Wang, Z Ma, KC Wong, X Li - Information Sciences, 2020 - Elsevier
Stratifying personalized treatment for patients has been one of the main challenges for
modern medicine. To solve this problem, various clustering algorithms have been proposed …

Identification of differentially expressed gene modules in heterogeneous diseases

O Zolotareva, S Khakabimamaghani, OI Isaeva… - …, 2021 - academic.oup.com
Motivation Identification of differentially expressed genes is necessary for unraveling
disease pathogenesis. This task is complicated by the fact that many diseases are …

Substra: supervised bayesian patient stratification

S Khakabimamaghani, YD Kelkar, BM Grande… - …, 2019 - academic.oup.com
Motivation Patient stratification methods are key to the vision of precision medicine. Here, we
consider transcriptional data to segment the patient population into subsets relevant to a …