Intrinsically disordered proteins: regulation and disease

MM Babu, R van der Lee, NS de Groot… - Current opinion in …, 2011 - Elsevier
Intrinsically disordered proteins (IDPs) are enriched in signaling and regulatory functions
because disordered segments permit interaction with several proteins and hence the re-use …

Polycomb group proteins: navigators of lineage pathways led astray in cancer

AP Bracken, K Helin - Nature Reviews Cancer, 2009 - nature.com
Abstract The Polycomb group (PcG) proteins are transcriptional repressors that regulate
lineage choices during development and differentiation. Recent studies have advanced our …

TOX transcriptionally and epigenetically programs CD8+ T cell exhaustion

O Khan, JR Giles, S McDonald, S Manne, SF Ngiow… - Nature, 2019 - nature.com
Abstract Exhausted CD8+ T (Tex) cells in chronic infections and cancer have limited effector
function, high co-expression of inhibitory receptors and extensive transcriptional changes …

Single-cell expression analyses during cellular reprogramming reveal an early stochastic and a late hierarchic phase

Y Buganim, DA Faddah, AW Cheng, E Itskovich… - Cell, 2012 - cell.com
During cellular reprogramming, only a small fraction of cells become induced pluripotent
stem cells (iPSCs). Previous analyses of gene expression during reprogramming were …

Reorganization of enhancer patterns in transition from naive to primed pluripotency

C Buecker, R Srinivasan, Z Wu, E Calo, D Acampora… - Cell stem cell, 2014 - cell.com
Naive and primed pluripotency is characterized by distinct signaling requirements,
transcriptomes, and developmental properties, but both cellular states share key …

Coordination of m6A mRNA methylation and gene transcription by ZFP217 regulates pluripotency and reprogramming

F Aguilo, F Zhang, A Sancho, M Fidalgo, S Di Cecilia… - Cell stem cell, 2015 - cell.com
Epigenetic and epitranscriptomic networks have important functions in maintaining the
pluripotency of embryonic stem cells (ESCs) and somatic cell reprogramming. However, the …

Integration of external signaling pathways with the core transcriptional network in embryonic stem cells

X Chen, H Xu, P Yuan, F Fang, M Huss, VB Vega… - Cell, 2008 - cell.com
Transcription factors (TFs) and their specific interactions with targets are crucial for
specifying gene-expression programs. To gain insights into the transcriptional regulatory …

Coexpression of Oct4 and Nanog Enhances Malignancy in Lung Adenocarcinoma by Inducing Cancer Stem Cell–Like Properties and Epithelial–Mesenchymal …

SH Chiou, ML Wang, YT Chou, CJ Chen, CF Hong… - Cancer research, 2010 - AACR
Abstract Epithelial–mesenchymal transition (EMT), a critical process of cancer invasion and
metastasis, is associated with stemness property of cancer cells. Though Oct4 and Nanog …

Induction of pluripotent stem cells from fibroblast cultures

K Takahashi, K Okita, M Nakagawa, S Yamanaka - Nature protocols, 2007 - nature.com
Clinical application of embryonic stem (ES) cells faces difficulties regarding use of embryos,
as well as tissue rejection after implantation. One way to circumvent these issues is to …

HEDGEHOG-GLI1 signaling regulates human glioma growth, cancer stem cell self-renewal, and tumorigenicity

V Clement, P Sanchez, N de Tribolet, I Radovanovic… - Current biology, 2007 - cell.com
Cancer stem cells are rare tumor cells characterized by their ability to self-renew and to
induce tumorigenesis. They are present in gliomas and may be responsible for the lethality …