Regulation of pre-mRNA splicing: roles in physiology and disease, and therapeutic prospects
The removal of introns from mRNA precursors and its regulation by alternative splicing are
key for eukaryotic gene expression and cellular function, as evidenced by the numerous …
key for eukaryotic gene expression and cellular function, as evidenced by the numerous …
Nuclear speckles–a driving force in gene expression
GP Faber, S Nadav-Eliyahu… - Journal of cell …, 2022 - journals.biologists.com
Nuclear speckles are dynamic membraneless bodies located in the cell nucleus. They
harbor RNAs and proteins, many of which are splicing factors, that together display complex …
harbor RNAs and proteins, many of which are splicing factors, that together display complex …
Systematic mapping of nuclear domain-associated transcripts reveals speckles and lamina as hubs of functionally distinct retained introns
The nucleus is highly compartmentalized through the formation of distinct classes of
membraneless domains. However, the composition and function of many of these structures …
membraneless domains. However, the composition and function of many of these structures …
Profiling lariat intermediates reveals genetic determinants of early and late co-transcriptional splicing
Long introns with short exons in vertebrate genes are thought to require spliceosome
assembly across exons (exon definition), rather than introns, thereby requiring transcription …
assembly across exons (exon definition), rather than introns, thereby requiring transcription …
Dynamics of RNA localization to nuclear speckles are connected to splicing efficiency
Nuclear speckles are nuclear membraneless organelles in higher eukaryotic cells playing a
vital role in gene expression. Using an in situ reverse transcription–based sequencing …
vital role in gene expression. Using an in situ reverse transcription–based sequencing …
Co-transcriptional gene regulation in eukaryotes and prokaryotes
M Shine, J Gordon, L Schärfen, D Zigackova… - … Reviews Molecular Cell …, 2024 - nature.com
Many steps of RNA processing occur during transcription by RNA polymerases. Co-
transcriptional activities are deemed commonplace in prokaryotes, in which the lack of …
transcriptional activities are deemed commonplace in prokaryotes, in which the lack of …
Genome organization around nuclear speckles drives mRNA splicing efficiency
The nucleus is highly organized, such that factors involved in the transcription and
processing of distinct classes of RNA are confined within specific nuclear bodies,. One …
processing of distinct classes of RNA are confined within specific nuclear bodies,. One …
Human histone H1 variants impact splicing outcome by controlling RNA polymerase II elongation
C Pascal, J Zonszain, O Hameiri, C Gargi-Levi… - Molecular Cell, 2023 - cell.com
Histones shape chromatin structure and the epigenetic landscape. H1, the most diverse
histone in the human genome, has 11 variants. Due to the high structural similarity between …
histone in the human genome, has 11 variants. Due to the high structural similarity between …
FUBP1 is a general splicing factor facilitating 3′ splice site recognition and splicing of long introns
S Ebersberger, C Hipp, MM Mulorz, A Buchbender… - Molecular cell, 2023 - cell.com
Splicing of pre-mRNAs critically contributes to gene regulation and proteome expansion in
eukaryotes, but our understanding of the recognition and pairing of splice sites during …
eukaryotes, but our understanding of the recognition and pairing of splice sites during …
Transcriptome-wide splicing network reveals specialized regulatory functions of the core spliceosome
ME Rogalska, E Mancini, S Bonnal, A Gohr… - Science, 2024 - science.org
The spliceosome is the complex molecular machinery that sequentially assembles on
eukaryotic messenger RNA precursors to remove introns (pre-mRNA splicing), a …
eukaryotic messenger RNA precursors to remove introns (pre-mRNA splicing), a …