RNA splicing by the spliceosome
ME Wilkinson, C Charenton… - Annual review of …, 2020 - annualreviews.org
The spliceosome removes introns from messenger RNA precursors (pre-mRNA). Decades
of biochemistry and genetics combined with recent structural studies of the spliceosome …
of biochemistry and genetics combined with recent structural studies of the spliceosome …
Challenges and opportunities in cryo-EM single-particle analysis
D Lyumkis - Journal of Biological Chemistry, 2019 - ASBMB
Cryogenic electron microscopy (cryo-EM) enables structure determination of
macromolecular objects and their assemblies. Although the techniques have been …
macromolecular objects and their assemblies. Although the techniques have been …
Characterisation of molecular motions in cryo-EM single-particle data by multi-body refinement in RELION
Macromolecular complexes that exhibit continuous forms of structural flexibility pose a
challenge for many existing tools in cryo-EM single-particle analysis. We describe a new …
challenge for many existing tools in cryo-EM single-particle analysis. We describe a new …
De novo variants in the RNU4-2 snRNA cause a frequent neurodevelopmental syndrome
Around 60% of individuals with neurodevelopmental disorders (NDD) remain undiagnosed
after comprehensive genetic testing, primarily of protein-coding genes. Large genome …
after comprehensive genetic testing, primarily of protein-coding genes. Large genome …
Mechanistic insights into precursor messenger RNA splicing by the spliceosome
Y Shi - Nature reviews Molecular cell biology, 2017 - nature.com
Precursor messenger RNA (pre-mRNA) splicing is an essential step in the flow of
information from DNA to protein in all eukaryotes. Research over the past four decades has …
information from DNA to protein in all eukaryotes. Research over the past four decades has …
Protein denaturation at the air-water interface and how to prevent it
Electron cryo-microscopy analyzes the structure of proteins and protein complexes in
vitrified solution. Proteins tend to adsorb to the air-water interface in unsupported films of …
vitrified solution. Proteins tend to adsorb to the air-water interface in unsupported films of …
Therapeutic targeting of splicing in cancer
SCW Lee, O Abdel-Wahab - Nature medicine, 2016 - nature.com
Recent studies have highlighted that splicing patterns are frequently altered in cancer and
that mutations in genes encoding spliceosomal proteins, as well as mutations affecting the …
that mutations in genes encoding spliceosomal proteins, as well as mutations affecting the …
Splicing and transcription touch base: co-transcriptional spliceosome assembly and function
L Herzel, DSM Ottoz, T Alpert… - Nature reviews Molecular …, 2017 - nature.com
Several macromolecular machines collaborate to produce eukaryotic messenger RNA. RNA
polymerase II (Pol II) translocates along genes that are up to millions of base pairs in length …
polymerase II (Pol II) translocates along genes that are up to millions of base pairs in length …
Processing of structurally heterogeneous cryo-EM data in RELION
SHW Scheres - Methods in enzymology, 2016 - Elsevier
This chapter describes algorithmic advances in the RELION software, and how these are
used in high-resolution cryo-electron microscopy (cryo-EM) structure determination. Since …
used in high-resolution cryo-electron microscopy (cryo-EM) structure determination. Since …
Sampling the conformational space of the catalytic subunit of human γ-secretase
Human γ-secretase is an intra-membrane protease that cleaves many different substrates.
Aberrant cleavage of Notch is implicated in cancer, while abnormalities in cutting amyloid …
Aberrant cleavage of Notch is implicated in cancer, while abnormalities in cutting amyloid …