Advances in risk classification and treatment strategies for neuroblastoma

NR Pinto, MA Applebaum, SL Volchenboum… - Journal of clinical …, 2015 - ascopubs.org
Risk-based treatment approaches for neuroblastoma have been ongoing for decades.
However, the criteria used to define risk in various institutional and cooperative groups were …

Neuroblastoma: paradigm for precision medicine

MS Irwin, JR Park - Pediatric Clinics, 2015 - pediatric.theclinics.com
Neuroblastoma (NB), the most common extracranial tumor of childhood, is a cancer of
primordial neural crest cells that give rise to sympathetic neural ganglia and adrenal …

Comparison of RNA-seq and microarray-based models for clinical endpoint prediction

W Zhang, Y Yu, F Hertwig, J Thierry-Mieg, W Zhang… - Genome biology, 2015 - Springer
Background Gene expression profiling is being widely applied in cancer research to identify
biomarkers for clinical endpoint prediction. Since RNA-seq provides a powerful tool for …

Efficiency correction is required for accurate quantitative PCR analysis and reporting

JM Ruijter, RJ Barnewall, IB Marsh… - Clinical …, 2021 - academic.oup.com
Abstract Background Quantitative PCR (qPCR) aims to measure the DNA or RNA
concentration in diagnostic and biological samples based on the quantification cycle (Cq) …

Hox-C9 activates the intrinsic pathway of apoptosis and is associated with spontaneous regression in neuroblastoma

H Kocak, S Ackermann, B Hero, Y Kahlert… - Cell death & …, 2013 - nature.com
Neuroblastoma is an embryonal malignancy of the sympathetic nervous system.
Spontaneous regression and differentiation of neuroblastoma is observed in a subset of …

Functional MYCN signature predicts outcome of neuroblastoma irrespective of MYCN amplification

LJ Valentijn, J Koster, F Haneveld… - Proceedings of the …, 2012 - National Acad Sciences
Neuroblastoma is a pediatric tumor of the sympathetic nervous system. MYCN (V-myc
myelocytomatosis viral-related oncogene, neuroblastoma derived [avian]) is amplified in …

Evaluation of qPCR curve analysis methods for reliable biomarker discovery: bias, resolution, precision, and implications

JM Ruijter, MW Pfaffl, S Zhao, AN Spiess, G Boggy… - Methods, 2013 - Elsevier
RNA transcripts such as mRNA or microRNA are frequently used as biomarkers to
determine disease state or response to therapy. Reverse transcription (RT) in combination …

Myc proteins as therapeutic targets

WC Gustafson, WA Weiss - Oncogene, 2010 - nature.com
Myc proteins (c-myc, Mycn and Mycl) target proliferative and apoptotic pathways vital for
progression in cancer. Amplification of the MYCN gene has emerged as one of the clearest …

Measurable impact of RNA quality on gene expression results from quantitative PCR

J Vermeulen, K De Preter, S Lefever… - Nucleic acids …, 2011 - academic.oup.com
Compromised RNA quality is suggested to lead to unreliable results in gene expression
studies. Therefore, assessment of RNA integrity and purity is deemed essential prior to …

Genomic amplifications and distal 6q loss: novel markers for poor survival in high-risk neuroblastoma patients

P Depuydt, V Boeva, TD Hocking… - JNCI: Journal of the …, 2018 - academic.oup.com
Background Neuroblastoma is characterized by substantial clinical heterogeneity. Despite
intensive treatment, the survival rates of high-risk neuroblastoma patients are still …