Biological and clinical implications of FGFR aberrations in paediatric and young adult cancers
LM Brown, PG Ekert, EDG Fleuren - Oncogene, 2023 - nature.com
Rare but recurrent mutations in the fibroblast growth factor receptor (FGFR) pathways, most
commonly in one of the four FGFR receptor tyrosine kinase genes, can potentially be …
commonly in one of the four FGFR receptor tyrosine kinase genes, can potentially be …
VRK1 is a synthetic–lethal target in VRK2-deficient glioblastoma
JA Shields, SR Meier, M Bandi, EE Mulkearns-Hubert… - Cancer Research, 2022 - AACR
Synthetic lethality is a genetic interaction that results in cell death when two genetic
deficiencies co-occur but not when either deficiency occurs alone, which can be co-opted for …
deficiencies co-occur but not when either deficiency occurs alone, which can be co-opted for …
Functional and regulatory impact of chimeric RNAs in human normal and cancer cells
S Mukherjee, SB Mukherjee… - Wiley …, 2023 - Wiley Online Library
Fusions of two genes can lead to the generation of chimeric RNAs, which may have a
distinct functional role from their original molecules. Chimeric RNAs could encode novel …
distinct functional role from their original molecules. Chimeric RNAs could encode novel …
A novel pipeline for prioritizing cancer type‐specific therapeutic vulnerabilities using DepMap identifies PAK2 as a target in head and neck squamous cell carcinomas
There is limited guidance on exploiting the genome‐wide loss‐of‐function CRISPR screens
in cancer Dependency Map (DepMap) to identify new targets for individual cancer types …
in cancer Dependency Map (DepMap) to identify new targets for individual cancer types …
Somatic structural variants drive distinct modes of oncogenesis in melanoma
JR Conway, R Gillani, J Crowdis, B Reardon… - The Journal of Clinical …, 2024 - jci.org
The diversity of structural variants (SVs) in melanoma and how they impact oncogenesis are
incompletely known. We performed harmonized analysis of SVs across melanoma histologic …
incompletely known. We performed harmonized analysis of SVs across melanoma histologic …
Building a translational cancer dependency map for The Cancer Genome Atlas
X Shi, C Gekas, D Verduzco, S Petiwala, C Jeffries… - Nature Cancer, 2024 - nature.com
Cancer dependency maps have accelerated the discovery of tumor vulnerabilities that can
be exploited as drug targets when translatable to patients. The Cancer Genome Atlas …
be exploited as drug targets when translatable to patients. The Cancer Genome Atlas …
[HTML][HTML] Alternative polyadenylation-related genetic variants contribute to bladder cancer risk
T Liu, J Gu, C Li, M Guo, L Yuan, Q Lv… - Journal of Biomedical …, 2023 - ncbi.nlm.nih.gov
Aberrant alternative polyadenylation (APA) events play an important role in cancers, but little
is known about whether APA-related genetic variants contribute to the susceptibility to …
is known about whether APA-related genetic variants contribute to the susceptibility to …
Analysis of cancer genomic amplifications identifies druggable collateral dependencies within the amplicon
Simple Summary Genomic amplifications are highly prevalent in cancer and often contribute
to increased proliferation or cell survival upon the administration of anti-cancer drugs. The …
to increased proliferation or cell survival upon the administration of anti-cancer drugs. The …
Generation of a biliary tract cancer cell line atlas reveals molecular subtypes and therapeutic targets
Biliary tract cancers (BTCs) are a group of deadly malignancies encompassing intrahepatic
and extrahepatic cholangiocarcinoma, gallbladder carcinoma, and ampullary carcinoma …
and extrahepatic cholangiocarcinoma, gallbladder carcinoma, and ampullary carcinoma …
[HTML][HTML] IMOPAC: A web server for interactive multiomics and pharmacological analyses of patient-derived cancer cell lines
G Li, D Wan, J Liang, P Zhu, Z Ding, B Zhang - Computational and …, 2023 - Elsevier
Large-scale multidimensional cancer genomic and pharmacological profiles have been
created by several large consortium projects, including NCI-60, GDSC and DepMap …
created by several large consortium projects, including NCI-60, GDSC and DepMap …