[HTML][HTML] Ontologies and knowledge graphs in oncology research

MC Silva, P Eugénio, D Faria, C Pesquita - Cancers, 2022 - mdpi.com
Simple Summary Cancer is a complex phenomenon and cancer research is increasingly
data-rich. Representing this knowledge in a manner that is both human and computer …

[HTML][HTML] Causal knowledge graph construction and evaluation for clinical decision support of diabetic nephropathy

K Lyu, Y Tian, Y Shang, T Zhou, Z Yang, Q Liu… - Journal of Biomedical …, 2023 - Elsevier
Background Many important clinical decisions require causal knowledge (CK) to take action.
Although many causal knowledge bases for medicine have been constructed, a …

Extracting postmarketing adverse events from safety reports in the vaccine adverse event reporting system (VAERS) using deep learning

J Du, Y Xiang, M Sankaranarayanapillai… - Journal of the …, 2021 - academic.oup.com
Objective Automated analysis of vaccine postmarketing surveillance narrative reports is
important to understand the progression of rare but severe vaccine adverse events (AEs) …

[HTML][HTML] Attention-based bidirectional long short-term memory networks for extracting temporal relationships from clinical discharge summaries

G Alfattni, N Peek, G Nenadic - Journal of Biomedical Informatics, 2021 - Elsevier
Temporal relation extraction between health-related events is a widely studied task in
clinical Natural Language Processing (NLP). The current state-of-the-art methods mostly rely …

ACE: the Advanced Cohort Engine for searching longitudinal patient records

A Callahan, V Polony, JD Posada… - Journal of the …, 2021 - academic.oup.com
Objective To propose a paradigm for a scalable time-aware clinical data search, and to
describe the design, implementation and use of a search engine realizing this paradigm …

[HTML][HTML] A novel method for constructing spatiotemporal knowledge graph for maritime ship activities

C Xie, L Zhang, Z Zhong - Electronics, 2023 - mdpi.com
This study focused on the construction of a spatiotemporal knowledge graph for ship
activities. First, a ship activity ontology model was proposed to describe the entities and …

Systematic design and data-driven evaluation of social determinants of health ontology (SDoHO)

Y Dang, F Li, X Hu, VK Keloth, M Zhang… - Journal of the …, 2023 - academic.oup.com
Objective Social determinants of health (SDoH) play critical roles in health outcomes and
well-being. Understanding the interplay of SDoH and health outcomes is critical to reducing …

[HTML][HTML] Achieving Inclusivity by Design: Social and Contextual Information in Medical Knowledge

J Hastings - Yearbook of medical informatics, 2022 - thieme-connect.com
Objectives: To select, present, and summarize the most relevant papers published in 2020
and 2021 in the field of Knowledge Representation and Knowledge Management, Medical …

[HTML][HTML] Temporal events detector for pregnancy care (TED-PC): a rule-based algorithm to infer gestational age and delivery date from electronic health records of …

T Lyu, C Liang, J Liu, B Campbell, P Hung, YW Shih… - PloS one, 2022 - journals.plos.org
Objective Identifying the time of SARS-CoV-2 viral infection relative to specific gestational
weeks is critical for delineating the role of viral infection timing in adverse pregnancy …

Tiny-UKSIE: An optimized lightweight semantic inference engine for reasoning uncertain knowledge

D Geng, H Li, C Liu - International Journal on Semantic Web and …, 2022 - igi-global.com
The application of semantic web technologies such as semantic inference to the field of the
internet of things (IoT) can realize data semantic information enhancement and semantic …