Bacterial transcription terminators: the RNA 3′-end chronicles

JM Peters, AD Vangeloff, R Landick - Journal of molecular biology, 2011 - Elsevier
The process of transcription termination is essential to proper expression of bacterial genes
and, in many cases, to the regulation of bacterial gene expression. Two types of bacterial …

Recent Development of Probiotic Bifidobacteria for Treating Human Diseases

J Chen, X Chen, CL Ho - Frontiers in bioengineering and …, 2021 - frontiersin.org
Bifidobacterium is a non-spore-forming, Gram-positive, anaerobic probiotic actinobacterium
and commonly found in the gut of infants and the uterine region of pregnant mothers. Like all …

Characterization of 582 natural and synthetic terminators and quantification of their design constraints

YJ Chen, P Liu, AAK Nielsen, JAN Brophy, K Clancy… - Nature …, 2013 - nature.com
Large genetic engineering projects require more cistrons and consequently more strong and
reliable transcriptional terminators. We have measured the strengths of a library of …

Highly reproductive Escherichia coli cells with no specific assignment to the UAG codon

T Mukai, H Hoshi, K Ohtake, M Takahashi… - Scientific reports, 2015 - nature.com
Escherichia coli is a widely used host organism for recombinant technology and the
bacterial incorporation of non-natural amino acids promises the efficient synthesis of …

Cyclic di-GMP riboswitch-regulated type IV pili contribute to aggregation of Clostridium difficile

E Bordeleau, EB Purcell, DA Lafontaine… - Journal of …, 2015 - Am Soc Microbiol
Clostridium difficile is an anaerobic Gram-positive bacterium that causes intestinal infections
with symptoms ranging from mild diarrhea to fulminant colitis. Cyclic diguanosine …

A patatin-like phospholipase mediates Rickettsia parkeri escape from host membranes

GM Borgo, TP Burke, CJ Tran, NTN Lo… - Nature …, 2022 - nature.com
Rickettsia species of the spotted fever group are arthropod-borne obligate intracellular
bacteria that can cause mild to severe human disease. These bacteria invade host cells …

Regulation of pyrroloquinoline quinone-dependent glucose dehydrogenase activity in the model rhizosphere-dwelling bacterium Pseudomonas putida KT2440

R An, LA Moe - Applied and environmental microbiology, 2016 - Am Soc Microbiol
Soil-dwelling microbes solubilize mineral phosphates by secreting gluconic acid, which is
produced from glucose by a periplasmic glucose dehydrogenase (GDH) that requires …

Rickettsia Sca4 reduces vinculin-mediated intercellular tension to promote spread

RL Lamason, E Bastounis, NM Kafai, R Serrano… - Cell, 2016 - cell.com
Spotted fever group (SFG) rickettsiae are human pathogens that infect cells in the
vasculature. They disseminate through host tissues by a process of cell-to-cell spread that …

Computational tools for discovering and engineering natural product biosynthetic pathways

H Ren, C Shi, H Zhao - Iscience, 2020 - cell.com
Natural products (NPs), also known as secondary metabolites, are produced in bacteria,
fungi, and plants. NPs represent a rich source of antibacterial, antifungal, and anticancer …

Effect of Genome Position on Heterologous Gene Expression in Bacillus subtilis: An Unbiased Analysis

C Sauer, S Syvertsson, LC Bohorquez… - ACS synthetic …, 2016 - ACS Publications
A fixed gene copy number is important for the in silico construction of engineered synthetic
networks. However, the copy number of integrated genes depends on their genomic …