An overview of gene regulation in bacteria by small RNAs derived from mRNA 3′ ends
Over the past two decades, small noncoding RNAs (sRNAs) that regulate mRNAs by short
base pairing have gone from a curiosity to a major class of post-transcriptional regulators in …
base pairing have gone from a curiosity to a major class of post-transcriptional regulators in …
Diversity and versatility in small RNA-mediated regulation in bacterial pathogens
B Felden, Y Augagneur - Frontiers in Microbiology, 2021 - frontiersin.org
Bacterial gene expression is under the control of a large set of molecules acting at multiple
levels. In addition to the transcription factors (TFs) already known to be involved in global …
levels. In addition to the transcription factors (TFs) already known to be involved in global …
In vivo RNA interactome profiling reveals 3'UTR-processed small RNA targeting a central regulatory hub
F Liu, Z Chen, S Zhang, K Wu, C Bei, C Wang… - Nature …, 2023 - nature.com
Small noncoding RNAs (sRNAs) are crucial regulators of gene expression in bacteria.
Acting in concert with major RNA chaperones such as Hfq or ProQ, sRNAs base-pair with …
Acting in concert with major RNA chaperones such as Hfq or ProQ, sRNAs base-pair with …
Role of the 5′ end phosphorylation state for small RNA stability and target RNA regulation in bacteria
A Schilder, B Görke - Nucleic Acids Research, 2023 - academic.oup.com
In enteric bacteria, several small RNAs (sRNAs) including MicC employ endoribonuclease
RNase E to stimulate target RNA decay. A current model proposes that interaction of the …
RNase E to stimulate target RNA decay. A current model proposes that interaction of the …
Discovery of the major 15–30 nt mammalian small RNAs, their biogenesis and function
H Lai, N Feng, Q Zhai - Nature Communications, 2023 - nature.com
Abstract Small RNAs (sRNAs) within 15-30 nt such as miRNA, tsRNA, srRNA with 3'-OH
have been identified. However, whether these sRNAs are the major 15-30 nt sRNAs is still …
have been identified. However, whether these sRNAs are the major 15-30 nt sRNAs is still …
Transcriptional and post-transcriptional control of the nitrate respiration in bacteria
S Durand, M Guillier - Frontiers in molecular biosciences, 2021 - frontiersin.org
In oxygen (O2) limiting environments, numerous aerobic bacteria have the ability to shift
from aerobic to anaerobic respiration to release energy. This process requires alternative …
from aerobic to anaerobic respiration to release energy. This process requires alternative …
Gene autoregulation by 3'UTR-derived bacterial small RNAs
M Hoyos, M Huber, KU Förstner, K Papenfort - Elife, 2020 - elifesciences.org
Negative feedback regulation, that is the ability of a gene to repress its own synthesis, is the
most abundant regulatory motif known to biology. Frequently reported for transcriptional …
most abundant regulatory motif known to biology. Frequently reported for transcriptional …
RNA interactome of hypervirulent Klebsiella pneumoniae reveals a small RNA inhibitor of capsular mucoviscosity and virulence
K Wu, X Lin, Y Lu, R Dong, H Jiang… - Nature …, 2024 - nature.com
Abstract Hypervirulent Klebsiella pneumoniae (HvKP) is an emerging bacterial pathogen
causing invasive infection in immune-competent humans. The hypervirulence is strongly …
causing invasive infection in immune-competent humans. The hypervirulence is strongly …
Comparison analysis of microbial agent and different compost material on microbial community and nitrogen transformation genes dynamic changes during pig …
This study aimed to assess the impact of microbial agent and different compost material, on
physicochemical parameters dynamic change, nitrogen-transfer gene/bacterial community …
physicochemical parameters dynamic change, nitrogen-transfer gene/bacterial community …
Prediction of novel bacterial small RNAs from RIL-Seq RNA–RNA interaction data
A Bar, L Argaman, Y Altuvia, H Margalit - Frontiers in Microbiology, 2021 - frontiersin.org
The genomic revolution and subsequent advances in large-scale genomic and
transcriptomic technologies highlighted hidden genomic treasures. Among them stand out …
transcriptomic technologies highlighted hidden genomic treasures. Among them stand out …