Ecosystems monitoring powered by environmental genomics: a review of current strategies with an implementation roadmap
T Cordier, L Alonso‐Sáez… - Molecular …, 2021 - Wiley Online Library
A decade after environmental scientists integrated high‐throughput sequencing
technologies in their toolbox, the genomics‐based monitoring of anthropogenic impacts on …
technologies in their toolbox, the genomics‐based monitoring of anthropogenic impacts on …
Linking metagenomics to aquatic microbial ecology and biogeochemical cycles
Microbial communities are essential components of aquatic ecosystems through their
contribution to food web dynamics and biogeochemical processes. Aquatic microbial …
contribution to food web dynamics and biogeochemical processes. Aquatic microbial …
Tax4Fun2: prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene sequences
Abstract Background Sequencing of 16S rRNA genes has become a powerful technique to
study microbial communities and their responses towards changing environmental …
study microbial communities and their responses towards changing environmental …
Diversity-triggered deterministic bacterial assembly constrains community functions
W Xun, W Li, W Xiong, Y Ren, Y Liu, Y Miao… - Nature …, 2019 - nature.com
A growing body of evidence suggests that microbial α-diversity (local species richness) may
have positive effects on ecosystem function. However, less attention has been paid to β …
have positive effects on ecosystem function. However, less attention has been paid to β …
New insight into ammonium oxidation processes and mechanisms mediated by manganese oxide in constructed wetlands
C Cheng, Q He, J Zhang, H Chai, Y Yang… - Water Research, 2022 - Elsevier
Manganese oxide (MnOx) mediated ammonium (NH 4+) oxidation in wetlands is receiving
increased interest; however, the biochemical mechanisms of this process are vague due to …
increased interest; however, the biochemical mechanisms of this process are vague due to …
Comparison of two 16S rRNA primers (V3–V4 and V4–V5) for studies of arctic microbial communities
Microbial communities of the Arctic Ocean are poorly characterized in comparison to other
aquatic environments as to their horizontal, vertical, and temporal turnover. Yet, recent …
aquatic environments as to their horizontal, vertical, and temporal turnover. Yet, recent …
Life-history strategies of soil microbial communities in an arid ecosystem
The overwhelming taxonomic diversity and metabolic complexity of microorganisms can be
simplified by a life-history classification; copiotrophs grow faster and rely on resource …
simplified by a life-history classification; copiotrophs grow faster and rely on resource …
High salinity inhibits soil bacterial community mediating nitrogen cycling
X Li, A Wang, W Wan, X Luo, L Zheng… - Applied and …, 2021 - Am Soc Microbiol
Salinization is considered a major threat to soil fertility and agricultural productivity
throughout the world. Soil microbes play a crucial role in maintaining ecosystem stability and …
throughout the world. Soil microbes play a crucial role in maintaining ecosystem stability and …
Leachable additives of tire particles explain the shift in microbial community composition and function in coastal sediments
Massive microplastics are deposited in the coastal zone. Tire particles (TPs) are an
important microplastic source, but little is known about how TPs affect the microbial …
important microplastic source, but little is known about how TPs affect the microbial …
Microdiversity ensures the maintenance of functional microbial communities under changing environmental conditions
Microdiversity can lead to different ecotypes within the same species. These are assumed to
provide stability in time and space to those species. However, the role of microdiversity in …
provide stability in time and space to those species. However, the role of microdiversity in …