Plants as the extended phenotype of endophytes—the actual source of bioactive compounds
N Rutkowska, P Drożdżyński, M Ryngajłło… - International Journal of …, 2023 - mdpi.com
For thousands of years, plants have been used for their medicinal properties. The industrial
production of plant-beneficial compounds is facing many drawbacks, such as seasonal …
production of plant-beneficial compounds is facing many drawbacks, such as seasonal …
Lifestyle transitions in fusarioid fungi are frequent and lack clear genomic signatures
Abstract The fungal genus Fusarium (Ascomycota) includes well-known plant pathogens
that are implicated in diseases worldwide, and many of which have been genome …
that are implicated in diseases worldwide, and many of which have been genome …
The Sordariomycetes: an expanding resource with Big Data for mining in evolutionary genomics and transcriptomics
Advances in genomics and transcriptomics accompanying the rapid accumulation of omics
data have provided new tools that have transformed and expanded the traditional concepts …
data have provided new tools that have transformed and expanded the traditional concepts …
Global genome mining-driven discovery of an unusual biosynthetic logic for fungal polyketide–terpenoid hybrids
D Yan, Y Matsuda - Chemical Science, 2024 - pubs.rsc.org
Genome mining has facilitated the efficient discovery of untapped natural products. We
performed global genome mining in fungi and discovered a series of biosynthetic gene …
performed global genome mining in fungi and discovered a series of biosynthetic gene …
Endophyte genomes support greater metabolic gene cluster diversity compared with non-endophytes in Trichoderma
Trichoderma is a cosmopolitan genus with diverse lifestyles and nutritional modes, including
mycotrophy, saprophytism, and endophytism. Previous research has reported greater …
mycotrophy, saprophytism, and endophytism. Previous research has reported greater …
Traits along the leaf economics spectrum are associated with communities of foliar endophytic symbionts
PH Tellez, AE Arnold, AB Leo, K Kitajima… - Frontiers in …, 2022 - frontiersin.org
Leaf traits of plants worldwide are classified according to the Leaf Economics Spectrum
(LES), which links leaf functional traits to evolutionary life history strategies. As a continuum …
(LES), which links leaf functional traits to evolutionary life history strategies. As a continuum …
CLOCI: unveiling cryptic fungal gene clusters with generalized detection
Gene clusters are genomic loci that contain multiple genes that are functionally and
genetically linked. Gene clusters collectively encode diverse functions, including small …
genetically linked. Gene clusters collectively encode diverse functions, including small …
Genome sequencing and molecular networking analysis of the wild fungus Anthostomella pinea reveal its ability to produce a diverse range of secondary metabolites
Background Filamentous fungi are prolific producers of bioactive molecules and enzymes
with important applications in industry. Yet, the vast majority of fungal species remain …
with important applications in industry. Yet, the vast majority of fungal species remain …
Applying molecular and genetic methods to trees and their fungal communities
Forests provide invaluable economic, ecological, and social services. At the same time, they
are exposed to several threats, such as fragmentation, changing climatic conditions, or …
are exposed to several threats, such as fragmentation, changing climatic conditions, or …
Terabase-scale coassembly of a tropical soil microbiome
Petabases of environmental metagenomic data are publicly available, presenting an
opportunity to characterize complex environments and discover novel lineages of life …
opportunity to characterize complex environments and discover novel lineages of life …