Web 3DNA 2.0 for the analysis, visualization, and modeling of 3D nucleic acid structures

S Li, WK Olson, XJ Lu - Nucleic acids research, 2019 - academic.oup.com
Abstract Web 3DNA (w3DNA) 2.0 is a significantly enhanced version of the widely used
w3DNA server for the analysis, visualization, and modeling of 3D nucleic-acid-containing …

Crystal structure of restriction endonuclease Kpn2I of CCGG-family

E Manakova, M Mikutenaite, D Golovenko… - … et Biophysica Acta (BBA …, 2021 - Elsevier
Background Restriction endonucleases belong to prokaryotic restriction-modification
systems, that protect host cells from invading DNA. Type II restriction endonucleases …

EcoRII Restriction Endonuclease Forms Specific Contacts to the Bases of Its Target Sequence Flipped from DNA in a Transition Complex with Photoactivatable …

OV Kirsanova, FV Subach, AG Loiko, RI Eritja… - Russian Journal of …, 2021 - Springer
The photoactivatable modified oligonucleotides were used to investigate direct contacts
formed by the type IIE EcoRII restriction endonuclease and the T/A bases of its recognition …