Selective sweeps

W Stephan - Genetics, 2019 - academic.oup.com
For almost 20 years, many inference methods have been developed to detect selective
sweeps and localize the targets of directional selection in the genome. These methods are …

Signatures of positive selection: from selective sweeps at individual loci to subtle allele frequency changes in polygenic adaptation

W Stephan - Molecular ecology, 2016 - Wiley Online Library
In the past 15 years, numerous methods have been developed to detect selective sweeps
underlying adaptations. These methods are based on relatively simple population genetic …

[HTML][HTML] A survey of methods and tools to detect recent and strong positive selection

P Pavlidis, N Alachiotis - Journal of Biological Research-Thessaloniki, 2017 - Springer
Positive selection occurs when an allele is favored by natural selection. The frequency of the
favored allele increases in the population and due to genetic hitchhiking the neighboring …

Structure Elucidation of the First Sex‐Inducing Pheromone of a Diatom

FA Klapper, C Kiel, P Bellstedt… - Angewandte Chemie …, 2023 - Wiley Online Library
Diatoms are abundant unicellular microalgae, responsible for≈ 20% of global
photosynthetic CO2 fixation. Nevertheless, we know little about fundamental aspects of their …

The Mosaic Ancestry of the Drosophila Genetic Reference Panel and the D. melanogaster Reference Genome Reveals a Network of Epistatic Fitness Interactions

JE Pool - Molecular biology and evolution, 2015 - academic.oup.com
Abstract North American populations of Drosophila melanogaster derive from both
European and African source populations, but despite their importance for genetic research …

[HTML][HTML] Genomes from historical Drosophila melanogaster specimens illuminate adaptive and demographic changes across more than 200 years of evolution

M Shpak, HR Ghanavi, JD Lange, JE Pool… - PLoS …, 2023 - journals.plos.org
The ability to perform genomic sequencing on long-dead organisms is opening new frontiers
in evolutionary research. These opportunities are especially notable in the case of museum …

[PDF][PDF] Detecting positive selection in populations using genetic data

A Koropoulis, N Alachiotis… - Statistical population …, 2020 - library.oapen.org
High-throughput genomic sequencing allows to disentangle the evolutionary forces acting in
populations. Among evolutionary forces, positive selection has received a lot of attention …

[HTML][HTML] Canalization of gene expression is a major signature of regulatory cold adaptation in temperate Drosophila melanogaster

K von Heckel, W Stephan, S Hutter - BMC genomics, 2016 - Springer
Background Transcriptome analysis may provide means to investigate the underlying
genetic causes of shared and divergent phenotypes in different populations and help to …

[HTML][HTML] A genome-wide scan for genes under balancing selection in Drosophila melanogaster

M Croze, A Wollstein, V Božičević, D Živković… - BMC evolutionary …, 2017 - Springer
Background In the history of population genetics balancing selection has been considered
as an important evolutionary force, yet until today little is known about its abundance and its …

Genomes from 25 historical Drosophila melanogaster specimens illuminate adaptive and demographic changes across more than 200 years of evolution

M Shpak, HR Ghanavi, JD Lange, JE Pool… - bioRxiv, 2023 - biorxiv.org
The ability to perform genomic sequencing on long-dead organisms is opening new frontiers
in evolutionary research. These opportunities are especially profound in the case of …