Integration of molecular docking analysis and molecular dynamics simulations for studying food proteins and bioactive peptides
A Vidal-Limon, JE Aguilar-Toalá… - Journal of Agricultural …, 2022 - ACS Publications
In silico tools, such as molecular docking, are widely applied to study interactions and
binding affinity of biological activity of proteins and peptides. However, restricted sampling of …
binding affinity of biological activity of proteins and peptides. However, restricted sampling of …
The genomics of coloration provides insights into adaptive evolution
A Orteu, CD Jiggins - Nature Reviews Genetics, 2020 - nature.com
Coloration is an easily quantifiable visual trait that has proven to be a highly tractable system
for genetic analysis and for studying adaptive evolution. The application of genomic …
for genetic analysis and for studying adaptive evolution. The application of genomic …
A complete telomere-to-telomere assembly of the maize genome
J Chen, Z Wang, K Tan, W Huang, J Shi, T Li, J Hu… - Nature …, 2023 - nature.com
A complete telomere-to-telomere (T2T) finished genome has been the long pursuit of
genomic research. Through generating deep coverage ultralong Oxford Nanopore …
genomic research. Through generating deep coverage ultralong Oxford Nanopore …
The complete reference genome for grapevine (Vitis vinifera L.) genetics and breeding
Grapevine is one of the most economically important crops worldwide. However, the
previous versions of the grapevine reference genome tipically consist of thousands of …
previous versions of the grapevine reference genome tipically consist of thousands of …
A beginner's guide to low‐coverage whole genome sequencing for population genomics
Low‐coverage whole genome sequencing (lcWGS) has emerged as a powerful and cost‐
effective approach for population genomic studies in both model and nonmodel species …
effective approach for population genomic studies in both model and nonmodel species …
Twelve quick steps for genome assembly and annotation in the classroom
Eukaryotic genome sequencing and de novo assembly, once the exclusive domain of well-
funded international consortia, have become increasingly affordable, thus fitting the budgets …
funded international consortia, have become increasingly affordable, thus fitting the budgets …
The changing face of genome assemblies: Guidance on achieving high‐quality reference genomes
The quality of genome assemblies has improved rapidly in recent years due to continual
advances in sequencing technology, assembly approaches, and quality control. In the field …
advances in sequencing technology, assembly approaches, and quality control. In the field …
Natural products of medicinal plants: biosynthesis and bioengineering in post-genomic era
Globally, medicinal plant natural products (PNPs) are a major source of substances used in
traditional and modern medicine. As we human race face the tremendous public health …
traditional and modern medicine. As we human race face the tremendous public health …
Widespread false gene gains caused by duplication errors in genome assemblies
Background False duplications in genome assemblies lead to false biological conclusions.
We quantified false duplications in popularly used previous genome assemblies for …
We quantified false duplications in popularly used previous genome assemblies for …
The genomics of ecological flexibility, large brains, and long lives in capuchin monkeys revealed with fecalFACS
JD Orkin, MJ Montague… - Proceedings of the …, 2021 - National Acad Sciences
Ecological flexibility, extended lifespans, and large brains have long intrigued evolutionary
biologists, and comparative genomics offers an efficient and effective tool for generating new …
biologists, and comparative genomics offers an efficient and effective tool for generating new …