A guide to phylogenetic metrics for conservation, community ecology and macroecology

CM Tucker, MW Cadotte, SB Carvalho… - Biological …, 2017 - Wiley Online Library
The use of phylogenies in ecology is increasingly common and has broadened our
understanding of biological diversity. Ecological sub‐disciplines, particularly conservation …

Molecular ecology meets systematic conservation planning

ES Nielsen, JO Hanson, SB Carvalho, M Beger… - Trends in Ecology & …, 2023 - cell.com
Integrative and proactive conservation approaches are critical to the long-term persistence
of biodiversity. Molecular data can provide important information on evolutionary processes …

The interplay of past diversification and evolutionary isolation with present imperilment across the amphibian tree of life

W Jetz, RA Pyron - Nature ecology & evolution, 2018 - nature.com
Human activities continue to erode the tree of life, requiring us to prioritize research and
conservation. Amphibians represent key victims and bellwethers of global change, and the …

Invasive predators and global biodiversity loss

TS Doherty, AS Glen, DG Nimmo… - Proceedings of the …, 2016 - National Acad Sciences
Invasive species threaten biodiversity globally, and invasive mammalian predators are
particularly damaging, having contributed to considerable species decline and extinction …

A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing

RO Prum, JS Berv, A Dornburg, DJ Field, JP Townsend… - Nature, 2015 - nature.com
Although reconstruction of the phylogeny of living birds has progressed tremendously in the
last decade, the evolutionary history of Neoaves—a clade that encompasses nearly all living …

Fully-sampled phylogenies of squamates reveal evolutionary patterns in threat status

JFR Tonini, KH Beard, RB Ferreira, W Jetz… - Biological …, 2016 - Elsevier
Macroevolutionary rates of diversification and anthropogenic extinction risk differ vastly
throughout the Tree of Life. This results in a highly heterogeneous distribution of …

Patterns, causes, and consequences of anthropocene defaunation

HS Young, DJ McCauley, M Galetti… - Annual review of …, 2016 - annualreviews.org
Anthropocene defaunation, the global extinction of faunal species and populations and the
decline in abundance of individuals within populations, has been predominantly …

Functional rarity: the ecology of outliers

C Violle, W Thuiller, N Mouquet, F Munoz… - Trends in Ecology & …, 2017 - cell.com
Rarity has been a central topic for conservation and evolutionary biologists aiming to
determine the species characteristics that cause extinction risk. More recently, beyond the …

Global priorities for conserving the evolutionary history of sharks, rays and chimaeras

RW Stein, CG Mull, TS Kuhn, NC Aschliman… - Nature ecology & …, 2018 - nature.com
In an era of accelerated biodiversity loss and limited conservation resources, systematic
prioritization of species and places is essential. In terrestrial vertebrates, evolutionary …

Fast dating using least-squares criteria and algorithms

TH To, M Jung, S Lycett, O Gascuel - Systematic biology, 2016 - academic.oup.com
Phylogenies provide a useful way to understand the evolutionary history of genetic samples,
and data sets with more than a thousand taxa are becoming increasingly common, notably …