Highly pathogenic avian influenza viruses at the wild–domestic bird interface in Europe: future directions for research and surveillance

JH Verhagen, RAM Fouchier, N Lewis - Viruses, 2021 - mdpi.com
Highly pathogenic avian influenza (HPAI) outbreaks in wild birds and poultry are no longer a
rare phenomenon in Europe. In the past 15 years, HPAI outbreaks—in particular those …

Cannabis Systematics at the Levels of Family, Genus, and Species

JM McPartland - Cannabis and cannabinoid research, 2018 - liebertpub.com
New concepts are reviewed in Cannabis systematics, including phylogenetics and
nomenclature. The family Cannabaceae now includes Cannabis, Humulus, and eight …

Emergence and spread of novel H5N8, H5N5 and H5N1 clade 2.3. 4.4 highly pathogenic avian influenza in 2020

NS Lewis, AC Banyard, E Whittard… - Emerging Microbes & …, 2021 - Taylor & Francis
Analyses of HPAI H5 viruses from poultry outbreaks across a wide Eurasian region since
July 2020 including the Russian Federation, Republics of Iraq and Kazakhstan, and recent …

Multi-rate Poisson tree processes for single-locus species delimitation under maximum likelihood and Markov chain Monte Carlo

P Kapli, S Lutteropp, J Zhang, K Kobert… - …, 2017 - academic.oup.com
Motivation In recent years, molecular species delimitation has become a routine approach
for quantifying and classifying biodiversity. Barcoding methods are of particular importance …

Surveillance of SARS-CoV-2 at the Huanan seafood market

WJ Liu, P Liu, W Lei, Z Jia, X He, W Shi, Y Tan, S Zou… - Nature, 2023 - nature.com
Abstract SARS-CoV-2, the causative agent of COVID-19, emerged in December 2019. Its
origins remain uncertain. It has been reported that a number of the early human cases had a …

ABGD, Automatic Barcode Gap Discovery for primary species delimitation

N Puillandre, A Lambert, S Brouillet… - Molecular ecology, 2012 - Wiley Online Library
Within uncharacterized groups, DNA barcodes, short DNA sequences that are present in a
wide range of species, can be used to assign organisms into species. We propose an …

Comparative genomics reveals insights into avian genome evolution and adaptation

G Zhang, C Li, Q Li, B Li, DM Larkin, C Lee, JF Storz… - Science, 2014 - science.org
Birds are the most species-rich class of tetrapod vertebrates and have wide relevance
across many research fields. We explored bird macroevolution using full genomes from 48 …

Plant DNA barcodes: Applications today and in the future

WJ Kress - Journal of systematics and evolution, 2017 - Wiley Online Library
DNA barcodes have provided a new biological tool for organismal biologists to increase
their understanding of the natural world. Over the last decade four plant DNA barcode …

DNA barcoding detects contamination and substitution in North American herbal products

SG Newmaster, M Grguric, D Shanmughanandhan… - BMC medicine, 2013 - Springer
Background Herbal products available to consumers in the marketplace may be
contaminated or substituted with alternative plant species and fillers that are not listed on the …

The spectre of too many species

AD Leaché, T Zhu, B Rannala, Z Yang - Systematic Biology, 2019 - academic.oup.com
Recent simulation studies examining the performance of Bayesian species delimitation as
implemented in the bpp program have suggested that bpp may detect population splits but …